PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.16G137300.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 300aa    MW: 33058.4 Da    PI: 5.987
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.16G137300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_153.35.9e-17141198360
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                          +l+r rr+ +NRe+ArrsR+RK+a + eLe  v++L++ N++L k+l+  ++++ +  
  Manes.16G137300.1.p 141 DLRRVRRMVSNRESARRSRKRKQAHLHELESQVEQLTGDNTSLYKQLSDASQQYNNAH 198
                          5899****************************************99999998887655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.3E-18139203IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.496141204IPR004827Basic-leucine zipper domain
PfamPF001701.1E-14142197IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-14143196No hitNo description
SuperFamilySSF579596.19E-13143194No hitNo description
CDDcd147022.57E-19144195No hitNo description
PROSITE patternPS000360146161IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MEQKKAAGDM KRSESELALQ EVIKKTTQIK GEEIKENRDN SFSAELDSFF SDDLSFCFKT  60
LETMNGFSES SVVWSQNISP KQSSISSAPI DTQSSVCVSS PLSANTKPNK KRASSSGSSD  120
DEDAETEAGP CEQSNNSNPI DLRRVRRMVS NRESARRSRK RKQAHLHELE SQVEQLTGDN  180
TSLYKQLSDA SQQYNNAHTN NRVLKSDVEA LRAKVKLAED MVTRGSLTCS LNQFLHQNHL  240
TLPQPLNNHN LRVSPTVTIN GDDASYTAGL GNTDINNGNL RNSVMSDAVS CVSELWPLD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155161RRSRKRK
2155162RRSRKRKQ
3157162SRKRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.16G137300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021596166.10.0basic leucine zipper 9
TrEMBLA0A2C9UBQ80.0A0A2C9UBQ8_MANES; Uncharacterized protein
STRINGcassava4.1_012780m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.16e-56basic leucine zipper 9