PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.18G118900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 194aa    MW: 21114.5 Da    PI: 5.3214
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.18G118900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-192171155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         s y+GVr +k +g+Wv+eIr+p   gk++r++lg+f+t+e+Aa a++ a++ ++g
  Manes.18G118900.1.p 21 SSYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFDTPEMAATAYDVAALHFRG 71
                         67*****999.**********8...557***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-122171IPR001471AP2/ERF domain
CDDcd000181.22E-332181No hitNo description
SuperFamilySSF541715.49E-232180IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-322280IPR001471AP2/ERF domain
SMARTSM003801.2E-402285IPR001471AP2/ERF domain
PROSITE profilePS5103224.0652279IPR001471AP2/ERF domain
PRINTSPR003673.1E-102334IPR001471AP2/ERF domain
PRINTSPR003673.1E-104561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MQEQTRNHGC GGGGGGGGTS SSYRGVRKRK WGKWVSEIRE PGKKTRIWLG SFDTPEMAAT  60
AYDVAALHFR GREAKLNFPE LVNDLPKPES SNAEDIRMAA HEAALRIRTP MKEPESGGGG  120
GSSGNVGSSN SVVGPVTVRL SQSQIQAINE SPLDSPKMWM QMAMVEDPMM FSHDVGEDDD  180
WNYNMQNDSL WDP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-171283476Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.18G118900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021601843.11e-142ethylene-responsive transcription factor ERF021
SwissprotQ9C9I21e-61ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A2C9U2R91e-141A0A2C9U2R9_MANES; Uncharacterized protein
STRINGcassava4.1_017419m1e-118(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.17e-60ERF family protein