PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.S017200.4.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family WRKY
Protein Properties Length: 414aa    MW: 46110.2 Da    PI: 5.1925
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.S017200.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.67e-25205261259
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         Dgy+WrKYGqK+vk+ + +rsYY+Ct+++C +kk +e++++ ++v+ei+++g+H h+
  Manes.S017200.4.p 205 PDGYSWRKYGQKQVKSPKGSRSYYKCTYSDCFAKK-IECADHSGHVIEIVNKGTHSHD 261
                        5********************************98.*********************7 PP
2WRKY391.6e-12379410334
                        -SS-EEEEEEE--TT-SS-EEEEEE-STT--- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpv 34 
                        Dgy+WrKYGqK+vkg+++pr  +  ++  C+v
  Manes.S017200.4.p 379 DGYRWRKYGQKMVKGNPHPRCMFVSSFILCMV 410
                        9********************99999988877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-19204263IPR003657WRKY domain
SMARTSM007747.6E-22204262IPR003657WRKY domain
SuperFamilySSF1182903.66E-19204263IPR003657WRKY domain
PfamPF031068.1E-17206261IPR003657WRKY domain
PROSITE profilePS5081116.926206263IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.6E-12362410IPR003657WRKY domain
PROSITE profilePS5081114.86372413IPR003657WRKY domain
SuperFamilySSF1182904.45E-10373411IPR003657WRKY domain
SMARTSM007749.1E-5377413IPR003657WRKY domain
PfamPF031062.3E-8379403IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MAERESLEAL QRQQNQKTHS EVQNDNNLEL EEGEVEDEEE EEEDEEEEEE SQLSELQQLP  60
DSQHVELSTS QVEELKESQL EGLVAAPSTQ ILSENHQCVG SRDNSALEPH VEAEFKGHEV  120
LGNLTTRHAE AQIQNEIQSS LCPTSLSELS PTSVTQPILS APSPTLPEIR QSPSKLNNVS  180
AQEADQQNSS DPKSLSVPIL KARIPDGYSW RKYGQKQVKS PKGSRSYYKC TYSDCFAKKI  240
ECADHSGHVI EIVNKGTHSH DPPRKNNPTR EIKVALSSAP VMSNSLKEHP ISTLKDSDQA  300
TLPKEPIKET PMSPEKKRQS SSGSDGNGRI QIKEEHISEP EPKRRVKKEN LECSDTLIKT  360
GKKPKFVVHA AGDVGISGDG YRWRKYGQKM VKGNPHPRCM FVSSFILCMV ENF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.S017200.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021602171.10.0probable WRKY transcription factor 32
TrEMBLA0A199UCS10.0A0A199UCS1_MANES; Uncharacterized protein
STRINGcassava4.1_032932m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.16e-75WRKY DNA-binding protein 32