PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.S034200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 320aa    MW: 36175.1 Da    PI: 4.3187
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.S034200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.56.1e-17109158154
                AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                        s ykGVr+++ +g++ AeIrd +     r  r++lg+++t+eeAa+a+ +  +++e
  Manes.S034200.1.p 109 SNYKGVRRRP-WGKYIAEIRDpF-----RkVRIWLGTYDTEEEAAAAYRKKEEEFE 158
                        57********.**********76.....45******************99988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.01E-16109155IPR016177DNA-binding domain
CDDcd000181.62E-22109150No hitNo description
PfamPF008472.6E-10109158IPR001471AP2/ERF domain
PROSITE profilePS5103218.584110169IPR001471AP2/ERF domain
SMARTSM003804.1E-16110175IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-20110152IPR001471AP2/ERF domain
PRINTSPR003671.3E-9111122IPR001471AP2/ERF domain
PRINTSPR003671.3E-9133149IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MPGLRGPILD QNLNSEEEKK KLGMEKSLRK VRIIYHDPEA TDSSSDEDEG FIERIDRLST  60
GKRIVREITL SILPCEPVAE DSSQHNSNGD KVRSTTNCGE NKKTRMASSN YKGVRRRPWG  120
KYIAEIRDPF RKVRIWLGTY DTEEEAAAAY RKKEEEFERM MEENKLNSSL NDSKAVPEQS  180
GDMFSHPSPS SVLDVSNTSS QVHGVESSIK EEISLQKAVK ECSLENLVED YFTEDLSISK  240
FWDEPLLSPS ISQDFLGIDC YPEFGNDFEK FFDGAEDFFM AKSNDEVGDF SLDGVLDLPN  300
IEELETLAFV EDTLNFACP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.S034200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021602398.10.0ethylene-responsive transcription factor WIN1-like
TrEMBLA0A199UBN10.0A0A199UBN1_MANES; Uncharacterized protein
STRINGcassava4.1_023899m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134512027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.15e-18cytokinin response factor 1