PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0001s0480.2.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family MYB
Protein Properties Length: 2011aa    MW: 220144 Da    PI: 6.0976
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0001s0480.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.14.7e-09868910347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                           WT  E +l++da++ +G++ +k+I++ +   +t+ qc+ ++ k 
  Mapoly0001s0480.2.p 868 QWTDFERDLFLDAIANHGKD-FKSISEQVV-SKTPSQCRTFYSKI 910
                          7*****************99.*********.**********9876 PP
2Myb_DNA-binding33.87.9e-1111941235346
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding    3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46  
                           +WT+eE e++++ ++++G++ W++  + ++ g++  q+k ++q+
  Mapoly0001s0480.2.p 1194 SWTQEEKEKFAEIIRRHGKD-WTLLDESLP-GKSMTQIKTYFQN 1235
                           7*****************99.*********.************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466899.72E-14653716IPR009057Homeodomain-like
PROSITE profilePS5129317.76665716IPR017884SANT domain
SMARTSM007176.2E-7666714IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.9E-4668713IPR009057Homeodomain-like
PROSITE profilePS5129315.008864915IPR017884SANT domain
SuperFamilySSF466891.42E-9865916IPR009057Homeodomain-like
SMARTSM007171.3E-7865913IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.1E-6866912IPR009057Homeodomain-like
PfamPF002491.9E-7868909IPR001005SANT/Myb domain
CDDcd001671.21E-5869907No hitNo description
SuperFamilySSF466891.08E-1111851239IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-811871236IPR009057Homeodomain-like
PROSITE profilePS512939.52111901241IPR017884SANT domain
SMARTSM007177.8E-911911239IPR001005SANT/Myb domain
CDDcd001676.59E-711941237No hitNo description
PfamPF002491.4E-911941235IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 2011 aa     Download sequence    Send to blast
MEQRVDRYAS GRGEEAHRRG VTGSQQLDTG QRDSSSLDKE MEARMDRYAS GRDTYARDAA  60
HSGKETSSTY DWKRRDRSSA TQWSPPFTSS SSSVQEGSGR FHGGFDLPTS TSSPQPSPFS  120
GASSLLGTDI AHDETSHMSP PKRPRPSRGE GTDSGHDEAS HPSVPTTKRP RLGWGQGLAK  180
YEKKKGTDGE DCSKGAHAAT KDENVKKTNA LSEEETSAER ASKPGNCPKK DSSEDKSLQE  240
GSPQTLQSKL VSGLPSDMSG WSKEAIAQQL LILEAEVEVV EKELAKLARE DDGDTVDEAT  300
LDSSVFAACE LVDMDEHNKA NQSESPQESG APDTKASDLE VEVTTVVTSV EVAPAALVAD  360
KANSQVIEVQ VLPSVEELSI STVVEDAHTE ANDPSKSDSE CQTLQDSDEQ MPLTGNSEQC  420
ESLSCACHGP DCGLCDVSDD DDEELPATNL GIGGLSDLMF YRYVFSIWNL ILENRRLARK  480
ALEPFQHLLL KDENSLDFKV NGSLENTTVW IQNEERHIKN QEQMMVKLSE RKKMLTFKER  540
VLAVKYRALK DECYQGQLGL CHRRDRVKPV RRWEVERRTA ANFAVASQRS TLRLRPIIAG  600
PTRLYTGQED AHTRRRFLAM NPANRLRQDL KMPEMILDEK ERCSRRFLSR NGLVEDPVSF  660
EQERKSVNPW TDEEKTLFLE KFPLFNKNFS KIASYFQHKT TADCIEFYYR NQKSEDFEKI  720
KRRRQQLKKR RDYSLSASQG VKSSRGSSHK VVEKARPVST YDSGNLDQLV VKSGFVKENK  780
SVSSEVKEMK AVSASDAATS GISPCSHCIG TPSTSKNYHD KLSVKGGSAF VTPFGKVSSV  840
EEHGDRKGNR TSPVLRDVVV ENEDNESQWT DFERDLFLDA IANHGKDFKS ISEQVVSKTP  900
SQCRTFYSKI RKRYRLDDMA EQAPETSPMD VGGLSSKSPA EIKVKLDVAG ESALDNSKST  960
DLGIVDMQKD SNAAEGMCKV EVVEGNEMAD GLSLLGEAVV NNLTNIPSEN TGDETKECCD  1020
AKEARGEDSA SKGEELVEAV TVCPTVDDQK QREQSVKVEP ETEVPVVENV IRVQNDASET  1080
STVKDEGGRV ESGMVVYGDP NWTSATPTSL VDPCCTLKAH EEDLGPGRVV VKAEPFVSLD  1140
TGAPSYTGVP LVTTQQSASV PVTSPLVTQS GPIRERGARL NAAGEFKPRR EPTSWTQEEK  1200
EKFAEIIRRH GKDWTLLDES LPGKSMTQIK TYFQNSKAKL GFLSTDGLAN PGTRGTCNRK  1260
RKPEESDTSS NAGSAGQICP PKVTLPGEDV LQKVVSSSMM AISTSVGTAG VGGDGVAYSH  1320
FNPGNCQPGE DSAARDLQKM IRRICSASEY GAQSNIVGGI LPIFQPGISS AYPGPNSQQS  1380
LLLAAQKQQL MVGHPTAQQV LPTQVGLQQQ QQPALTNHKQ QQLISHVVQQ LQQQAVQQLQ  1440
QQQQQTNQLV VHQPQMVHQL QQLVQMQQQQ QQHLAQVAKH IPPQLVHQQS HQHLPLGPNV  1500
VHQQQMVSRA KLAAAGVQQQ VGHVSRLHPS HTQQQLFQQQ QQIIQQQKQQ QLILQQIQAT  1560
QLQHDLQLHQ QMQVQKQQQQ LPQHHHQQQQ LQHGQPLALF RGSYQSSLAE AELLRHSEVV  1620
EQRNTPANLG LLPREDLQVQ SQRAQQNLAQ QQQARAPPSS ESQRLRMGDV KLFGQSLLSQ  1680
PQPNTGTPSI SNTHKTGQPA SPATTAPSAS SASKYFVVTE PTVLAPPAFN RQAGTALVGE  1740
GSQSWPLGSV GNLDLWNSMM GGLQGGGSLY KNEDASKLEV CSVHEAITKM TARPNREGHE  1800
LEGDDLHNAP AGGISNDHQR STDAACDLVR IGASDASEGP NNDGHIRMEN EWRIIPRANP  1860
AAVLNAQGGY SHVVLDPHYP YSGERQSITS QGVVNQTWDG VRERDSNRNS VESGIGTLVP  1920
PALASEMISQ QINSRSEVYA PLSLPLPAAA AVTKISSWPV SGSLALAGES VGGSFQSQGV  1980
ILRGLPDVEQ PCTMITDSKS KNVDNSGGPG *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4a69_C2e-15626718394NUCLEAR RECEPTOR COREPRESSOR 2
4a69_D2e-15626718394NUCLEAR RECEPTOR COREPRESSOR 2
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141145KRPRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XWR80.0A0A2R6XWR8_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52250.11e-38MYB family protein