PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0002s0031.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

Trihelix

Protein Properties

Length: 216aa MW: 24380.8 Da PI: 7.4093

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0002s0031.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.5	4.5e-10	111	195	2	86
trihelix 2 WtkqevlaLiearremeerlrrgk....lkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W +e+ +Li +r++ + +++g ++++lW+ v+ ++ e++ ++ kqC+ w+ l k+y + +g+k++ + +p+f++++ Mapoly0002s0031.1.p 111 WATNEIEHLILMRTSADGLFKQGVkekfSIMKLWDFVAGQLpGEGQARKDGKQCQWMWNMLMKEYTDVLTGAKEK-----KDFPHFEEMD 195 9******************8743445889******66777788******************9984.....568***98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	7.2E-9	110	196	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence Send to blast
MRSFLRSSSR ALTLFHNYRS LMMGSTACGN VSPGTEGRGR NCNVNDQEQA PDSTVGVTDI 60 ALHYQRQSFV TSAPEPFGVM SVYDTIFLKT LRIVNEQGAT LVSRVLERTF WATNEIEHLI 120 LMRTSADGLF KQGVKEKFSI MKLWDFVAGQ LPGEGQARKD GKQCQWMWNM LMKEYTDVLT 180 GAKEKKDFPH FEEMDQVWKC TSSADVERDL TCSPK*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6XTT8	1e-162	A0A2R6XTT8_MARPO; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	3e-09	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Mapoly0002s0031.1.p