PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0002s0032.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

Trihelix

Protein Properties

Length: 210aa MW: 23911.4 Da PI: 6.1314

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0002s0032.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.9	7.1e-10	109	193	2	86
trihelix 2 WtkqevlaLiearremeerlrrgk....lkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W +e+ Li +r++ + +++g ++++lW+ v+ ++ +e++ ++ kqC+ w+ l k+y + +g+k+r + +p+f++++ Mapoly0002s0032.1.p 109 WDASEIEYLILMRTSADGLFKQGVkdkfSIMKLWDFVAGQLpSEGQARKDGKQCQWMWNMLMKEYTDVLTGAKER-----KDFPHFEEMD 193 99*****************8743445899******55666677********************96.....5699**98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51257	5	1	26	No hit	No description
Pfam	PF13837	6.3E-9	108	194	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence Send to blast
MGSVLHRIRE KKLAHVLSLM MASTACGDVS PGTERRKQKC NIDDQEQVPD STVVVTDIAL 60 HYQRQCFVTS APESVGVISV YDTIFLKTFK IVNEQGATLV SRVLERTFWD ASEIEYLILM 120 RTSADGLFKQ GVKDKFSIMK LWDFVAGQLP SEGQARKDGK QCQWMWNMLM KEYTDVLTGA 180 KERKDFPHFE EMDQAWECTC GKRLEDINN*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6XTW4	1e-156	A0A2R6XTW4_MARPO; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	1e-08	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Mapoly0002s0032.1.p