PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0002s0204.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 353aa    MW: 39694.8 Da    PI: 8.8374
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0002s0204.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.41.8e-1391170275
             trihelix   2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 
                          Wt  ev++L +a+re+ er ++g      k ++ +W ++ + ++ + ++rs++qC++kwe+l  ++kk+ + e++   ++
  Mapoly0002s0204.1.p  91 WTVPEVMVLQAAKREDFERHSKGglkekhKTAQERWLWIEDICWGHAIHRSAQQCQDKWESLVPEFKKVLDYERNLPIGQ 170
                          **************99999998644444468899***********************************99999864444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.31987153IPR017877Myb-like domain
PfamPF138376.6E-1090165No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MENHVFRGFG DKDGRARKQE VEYSWSTGGG GGRTLSHGLA LSQVAGSVMG EHPSEVLAGD  60
HRAMSVDEDV VYEEPGHAGS RKGRVYKKGA WTVPEVMVLQ AAKREDFERH SKGGLKEKHK  120
TAQERWLWIE DICWGHAIHR SAQQCQDKWE SLVPEFKKVL DYERNLPIGQ KSYWLMIPEE  180
RKKTPKLPPN LPKEVFSALF EWYLKSKTID QGDLLVDNST PPRTGNSSSM AGSNGEFSGI  240
EGEGTNDNRT SGLKRKLHSK TVDGVGSVLE GNNKNVVAAM MKCEDRKDKR HRDKLELSLQ  300
RHRETMEMNM QRHRESLELN QKLGEGYISA LCSIGEGLKQ LVNTLQSTSR HM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024384743.12e-81trihelix transcription factor ASR3-like
RefseqXP_024384744.12e-81trihelix transcription factor ASR3-like
RefseqXP_024384745.12e-81trihelix transcription factor ASR3-like
RefseqXP_024384746.12e-81trihelix transcription factor ASR3-like
RefseqXP_024384747.12e-81trihelix transcription factor ASR3-like
TrEMBLA0A2R6XUJ60.0A0A2R6XUJ6_MARPO; Uncharacterized protein
STRINGPP1S314_53V6.29e-81(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18811637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-17Trihelix family protein