PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0004s0047.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family LBD
Protein Properties Length: 131aa    MW: 15249.7 Da    PI: 9.3141
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0004s0047.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26039.41.7e-122662994
               DUF260 29 kfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
                          fan+h+lF+++n+++l+++ +++  e++m+s+++e++ r rd v+G +g+++  q++ e+l+++ 
  Mapoly0004s0047.1.p  2 CFANAHRLFRVANISRLIRE-NRSSVENVMKSVCFESNTRERDLVNGIYGTLRYFQREAERLEENR 66
                         69******************.888899*********************************999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031951.1E-9366IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MCFANAHRLF RVANISRLIR ENRSSVENVM KSVCFESNTR ERDLVNGIYG TLRYFQREAE  60
RLEENRTAWS AFFGVLQVLQ SITHMHCLLR SPLQRQRQRC KTTMFIICCS SIYNSNNCIT  120
CRCPSSRCLL *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XRP11e-89A0A2R6XRP1_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.48e-10LBD family protein