PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0008s0159.2.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 727aa    MW: 77605.5 Da    PI: 7.8687
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0008s0159.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.72.4e-33317374260
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                          +DgynWrKYGqK+vkgsefprsYY+Ct+a+Cp+kkkvers  d++v+ei+Y+geHnh+k
  Mapoly0008s0159.2.p 317 EDGYNWRKYGQKQVKGSEFPRSYYKCTHATCPMKKKVERSL-DGQVTEIVYKGEHNHPK 374
                          7****************************************.***************85 PP
2WRKY106.51.4e-33508566159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++dpk+v++tYeg+Hnh+
  Mapoly0008s0159.2.p 508 LDDGYRWRKYGQKVVKGNPHPRSYYKCTNQGCPVRKHVERASNDPKAVITTYEGKHNHD 566
                          59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.4E-29308375IPR003657WRKY domain
SuperFamilySSF1182903.66E-25314375IPR003657WRKY domain
SMARTSM007743.8E-37316374IPR003657WRKY domain
PfamPF031064.0E-26317373IPR003657WRKY domain
PROSITE profilePS5081123.697317375IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-38493568IPR003657WRKY domain
SuperFamilySSF1182904.18E-30500568IPR003657WRKY domain
PROSITE profilePS5081138.893503568IPR003657WRKY domain
SMARTSM007741.1E-40508567IPR003657WRKY domain
PfamPF031067.1E-27509566IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 727 aa     Download sequence    Send to blast
MEGGEMSGTG VEFGQVVLRK PTPSRPQSSM RGGPGDMGMS LLSQGFAEHE SDRSFTHMLA  60
GATSPPSSED GKGGGMDSDG MNTGVRALGG GGGSFAGRLL ARQKDLADMG GGMGGGGLLN  120
QAKIMPPSRI AMPQQMPDFQ QLTIPPGLSP SQLLDSPVFL ANHQAEPSPT TGTFPLPPFL  180
AEPPKDKNND QGSTPGFVFK PFPVSAMRNP MSPLSQGLGH QFGNSQQMHQ TQSQTQSGGQ  240
QMLSNVQSLG GHGQGNNNNN SNPGSSSAMP VAVALSMPSP PTRQQPERSS ESQQTHSPEQ  300
ETQPPPQHTT YIERPSEDGY NWRKYGQKQV KGSEFPRSYY KCTHATCPMK KKVERSLDGQ  360
VTEIVYKGEH NHPKPQPTRR LAVAAAQLIS DNASDRADGD EKWGGFQTHG GDYGVKHERG  420
DDPSSSVRGR PSLGFTLGQN GTPEPSSPST SEDGSKSLTE DGDDEDGPDH KRRKKDKRAV  480
KEQLPPSAPR TIREPRVVVQ TTSDVDILDD GYRWRKYGQK VVKGNPHPRS YYKCTNQGCP  540
VRKHVERASN DPKAVITTYE GKHNHDVPLA RNSSHDNAGA GGGNASATSQ SAASSHAGPA  600
LQQQQGYGRR MSVFGRHLED GSKGDSTGAD VDLGMGVGMG QSMRNMDGSG VGNNTVNGDM  660
SVSTSIAMNL QQSLGQRQMM MVQPFGGGSN QHDSLRPKQE QDESHHHNGG LQPSNVYQPQ  720
RVSLGP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-38317568877Probable WRKY transcription factor 4
2lex_A7e-38317568877Probable WRKY transcription factor 4
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1471476RRKKDK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024368161.11e-169WRKY transcription factor SUSIBA2-like isoform X3
TrEMBLA0A2R6XMS10.0A0A2R6XMS1_MARPO; Uncharacterized protein
STRINGPP1S135_80V6.11e-166(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.12e-84WRKY DNA-binding protein 4