PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0011s0171.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family STAT
Protein Properties Length: 764aa    MW: 83872.1 Da    PI: 6.7873
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0011s0171.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT190.61.8e-592313491118
                 STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfei 89 
                          ldv ll+alg++++k++e+vasL+y+ds l+vek+ ddaeapLL+++dGvef+s++rp+kl++GrasfklkisqLsskcdnrLfr++f++
  Mapoly0011s0171.1.p 231 LDVALLDALGRSIHKEMELVASLVYSDSNLPVEKPkDDAEAPLLTTFDGVEFPSTERPIKLVHGRASFKLKISQLSSKCDNRLFRVCFDS 320
                          89********************************999***************************************************** PP

                 STAT  90 pklkkypfleavskpirCisrsrntrsss 118
                          p+  kypfl+a+s+pirC+sr+rn+r+ +
  Mapoly0011s0171.1.p 321 PSTPKYPFLRAFSRPIRCVSRNRNHRAPA 349
                          *************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.505.101.8E-5653730IPR000980SH2 domain
SuperFamilySSF555509.33E-7657724IPR000980SH2 domain
PROSITE profilePS5000110.582661747IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 764 aa     Download sequence    Send to blast
MCTKSSGAVF GDDDYLQLDS LSLSFRRGGS PEHETHTLCF WLYLLKSSLP GIIIRQGTKG  60
QLDDVRAVPF LTLDTDRKLA LHGLHPEGDD AEISNDMDVL LAEKPCNIEK WVHVGCEIGS  120
DIARLHIDGV IVGEKRLPLP AFGESETGEK EEVLLRGGSG LSAGSPVQAF AYLVRMLPQP  180
TVTNHYVKNP PLELLLEGTS GATDDHEVEE GGDGSWSVVG GKASCRRNFA LDVALLDALG  240
RSIHKEMELV ASLVYSDSNL PVEKPKDDAE APLLTTFDGV EFPSTERPIK LVHGRASFKL  300
KISQLSSKCD NRLFRVCFDS PSTPKYPFLR AFSRPIRCVS RNRNHRAPAA PYKRPHSAAF  360
PQEGAISPNA EETITTEVDS ICNGSSAAPS ANGPYHKRNR TGVEKPAVPV LINSRGGAIH  420
SPTLDTRTNG YAVSGDGRSQ WLIHPAATLA TAPLKLPSAY SGNSGGTPRL DVPGVAADYG  480
TKHEVHREGR HKFTGRVESP LSRNPSSPLS DFLVFKYCLE NIQGRTAFLK LFIVNHGDQE  540
LAELAARVSH CTGCRHDGYQ IMISKSLILE ANEVWSEATR KSLPPLWTQV ISCVEERFTK  600
ISSVQRMLSI KDKEFLNRVA GCGDFVTREQ FDSLWSWIYP IALTLRSSQV RAIWDNEEPK  660
WIEGMIYKEE VEALLLRSSE SMAKPGTFLL RFACSRFWPH PDAGALVVSY VGHDLRINHK  720
LLSLDEGSGF NPGERPLPEQ LLSQPELKQL CKVPSTLSNG TNA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024357244.10.0SH2 domain-containing protein A-like
RefseqXP_024357246.10.0SH2 domain-containing protein A-like
TrEMBLA0A2R6XK530.0A0A2R6XK53_MARPO; Uncharacterized protein
STRINGPP1S40_125V6.10.0(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP59411618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.21e-54SH2 domain protein B