PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0012s0172.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bZIP
Protein Properties Length: 484aa    MW: 51658.5 Da    PI: 5.4918
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0012s0172.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.79e-17279332356
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                          +lkr +r+ +NRe+ArrsR+RK+a + eLe+ v++L  eN++L k+l  ++++ 
  Mapoly0012s0172.1.p 279 DLKRVKRMLSNRESARRSRRRKQAHLSELETQVAQLRVENTTLVKRLTDISQKF 332
                          69******************************************9998877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-20277341IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.1E-12278332No hitNo description
PROSITE profilePS5021711.415279331IPR004827Basic-leucine zipper domain
PfamPF001701.9E-14280330IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.56E-12281330No hitNo description
PROSITE patternPS000360284299IPR004827Basic-leucine zipper domain
PfamPF124982.7E-14348454IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MERVFSVDDI LGTFWKLDTQ SGDQASSTGA VNGTGVLGNG GNGYNPGMNR SASEWAFQEF  60
LKEHTQASGL QSRNDSQVFM ISEEEAGEKE LPPSQDKECV EEQKEPDVIS IPGLKEEVDE  120
SSYTASNQKA EDPLEQPELK VAVNPLFSGL RDEVPAAPAS SDPREYEHFL KRRLDIACAA  180
VAMSRATGLG SPKIAGNLSL QQAVPQGKGA APGLLGADVA ANGSHVRGPV GIPALPPKPD  240
SLAPVSSAKP TTSGSSREQS DDEDGDDGVV NDQNLEPGDL KRVKRMLSNR ESARRSRRRK  300
QAHLSELETQ VAQLRVENTT LVKRLTDISQ KFSDAAVDNR VLKSDVEALR AKVKMAEDLV  360
TRATGQTVAH PPHIPASLGM SHGFSYMPGP YVASAMPPTH GYLHHSLPVS SQAFPVELPS  420
LPTGQQGLSG KMGRTPSMQR VASLEHLQKR SRGGTCSSTS AWGAGWDMEG PSMVEQSSIN  480
GDH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1293300RRSRRRKQ
2295300SRRRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XJG80.0A0A2R6XJG8_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18391639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.18e-44bZIP family protein