PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0013s0167.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

bHLH

Protein Properties

Length: 172aa MW: 19580.3 Da PI: 6.7645

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0013s0167.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.7	2e-13	3	45	8	55
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +ErrRR+r N++fe++r ++P+a K++K++ L ++veYIksL+ Mapoly0013s0167.1.p 3 AERRRRNRQNESFERIRGIVPSA-----LKMDKITLLGETVEYIKSLK 45 6*******************7.....6***************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	13.891	1	44	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.1E-11	1	50	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	2.88E-14	2	59	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	5.7E-11	3	44	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.8E-14	3	58	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.31E-5	10	49	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence Send to blast
MYAERRRRNR QNESFERIRG IVPSALKMDK ITLLGETVEY IKSLKQRLKQ LEEINMALSS 60 SGQDAGSFKC EDIKVIPSRT HSPTQDMTQA TPEDEDTLKI EVVRNDCSQE DTAIDIFTCL 120 RDLELTVTHA SVSTNVYRIH ATIKVKMPKQ SSNDQFAVCS EIEEALRRCL R*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6XIR6	1e-123	A0A2R6XIR6_MARPO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP11631	3	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46760.1	2e-15	bHLH family protein

Link Out ? help Back to Top
Phytozome	Mapoly0013s0167.1.p