PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0021s0100.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 634aa    MW: 70122.1 Da    PI: 6.5077
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0021s0100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.7e-08457500654
                          HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                           +rE+ RR+++ + +++L+++lPk      +K++ a+iL+ ++  +k L
  Mapoly0021s0100.1.p 457 FAREKLRREKLTENYNTLKSMLPKH-----TKVDRASILQATIARVKLL 500
                          79**********************9.....8***********9887766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.979451500IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.1E-9456513IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-5457500IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-5457505IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.33E-7458505No hitNo description
Gene3DG3DSA:4.10.280.101.9E-7458512IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 634 aa     Download sequence    Send to blast
MLNCDMSRKK SRAEGSSSLT YDRHGFSARA GICCPDELYN EHLALLNWGR RSEPPLDMAV  60
SMFPIPLQSL ECEDANPQNK DVTVSPMCIM RPEFSLENFP DPDNRYNQFR EVQEHVQQED  120
FSNISSSFPE TFTDGTRFCV PQYPVQEGIN NASGDSIASA AAQEQVDALG GLTLTPYSNN  180
FLDQMFREPA AVHVHGHHPI NLGSNSQLRD GIDPCIRSKH NSCSTLEASY PSPASQSARE  240
SILRTTVPPS PGELSCQDHA LMQLQLNFAL NDEFIRLQGA QGKSRSHDPI LSLLPAVDTY  300
FPERDGKSGL ESSGEIMKFE ANLDTDVDTS CGLKMPQLHV LHGKAPTNLP PLNGAHLAAP  360
SPMRYPEGGS EAGLICAGGR QKKDILAAPV AEAPHFHKRA SFSRVNSDPA PLAPQHGSAS  420
MDTSKARNAQ NRDRVPSNKC VAQTPSHLDA GPVSSTFARE KLRREKLTEN YNTLKSMLPK  480
HTKVDRASIL QATIARVKLL ESEKSYLENM KQKRSIMKNL QAQEKAAEGQ ISEQSGEVDC  540
HWLKRTSRHG TRVDMRIVHD EMYVNIVQQH LPMFLLRIMS FLETKLKLDI LNATGSVING  600
FDVYNFELKI KGELCGDASE VMRNIMDTLD SVI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176WCJ80.0A0A176WCJ8_MARPO; Uncharacterized protein
TrEMBLA0A2R6XDR20.0A0A2R6XDR2_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.24e-15bHLH family protein