PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0026s0039.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bZIP
Protein Properties Length: 504aa    MW: 55387.9 Da    PI: 7.525
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0026s0039.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.21.2e-10200242446
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                          +k+ rr+++NReAAr+sR+RKka++++Le    +L +  ++L+
  Mapoly0026s0039.1.p 200 SKALRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQ 242
                          7999*************************86655555554444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-4197250IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.8E-8197250No hitNo description
PROSITE profilePS502179.473199248IPR004827Basic-leucine zipper domain
PfamPF001706.7E-8201247IPR004827Basic-leucine zipper domain
CDDcd147082.17E-21201247No hitNo description
SuperFamilySSF579594.31E-7201249No hitNo description
PROSITE patternPS000360204219IPR004827Basic-leucine zipper domain
PfamPF141445.1E-34303378IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 504 aa     Download sequence    Send to blast
MANSRGQRGP GVPAPIASAS PPVLHGMQGL SSSPPHLIAS FGAEPIKDHT GGYDLGELEQ  60
PLSFNLDEEL DLGERHSTVT SRPTLHILQS GPFRFSDTAN KQRQQPNQQQ QQQQSSQVTS  120
PSAASTDSRS AHFTPRRHPS FESPSSRQFE HWGDSRMADN SPRTDTSTDM EADVKLEDAH  180
HGANAGSNAS DHEATKNGDS KALRRLAQNR EAARKSRLRK KAYVQQLESS RIKLNQLEQE  240
LQRARQQLMT VRGERVQGVY HLGGYGDQNP HGVGGNGVNG AINPGAAAFD MEYGRWVDEQ  300
IRQMCDLRAA LQAHVADNEL RVLVDGGMAH YDEIFRLKSI AAKADVFHLV SGMWKTPAER  360
CFMWMGGFRP SELLKILIPQ IEPLTEQQLL GICNLQQSSQ QAEDALSQGM EALQQSLADT  420
LAAGSLGSSP NVANYMGQMA MAMGKLGTLE SFVRQADNLR QQTLQQMYRI LTTRQAARGL  480
LAMGDYFARL RALSSLWSAR PRD*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024529114.10.0transcription factor TGA2.3
RefseqXP_024536795.10.0transcription factor TGA2.3 isoform X1
SwissprotQ415581e-156HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2R6XAM10.0A0A2R6XAM1_MARPO; Uncharacterized protein
STRINGPP1S258_7V6.11e-180(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7221667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-131TGACG motif-binding factor 6