PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0026s0039.2.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bZIP
Protein Properties Length: 338aa    MW: 37217 Da    PI: 7.6629
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0026s0039.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-104482442
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42
                         +k+ rr+++NReAAr+sR+RKka++++Le    +L +  
  Mapoly0026s0039.2.p 44 SKALRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLE 82
                         7999************************98555444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.5E-84187No hitNo description
SMARTSM003388.1E-841105IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.1744387IPR004827Basic-leucine zipper domain
PfamPF001702.5E-74584IPR004827Basic-leucine zipper domain
CDDcd147081.88E-214594No hitNo description
SuperFamilySSF579593.94E-74588No hitNo description
PROSITE patternPS0003604863IPR004827Basic-leucine zipper domain
PfamPF141442.7E-34137212IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MADNSPRTDT STDMEADVKL EDAHHGANAG SNASDHEATK NGDSKALRRL AQNREAARKS  60
RLRKKAYVQQ LESSRIKLNQ LEQELQRARQ QGVYHLGGYG DQNPHGVGGN GVNGAINPGA  120
AAFDMEYGRW VDEQIRQMCD LRAALQAHVA DNELRVLVDG GMAHYDEIFR LKSIAAKADV  180
FHLVSGMWKT PAERCFMWMG GFRPSELLKI LIPQIEPLTE QQLLGICNLQ QSSQQAEDAL  240
SQGMEALQQS LADTLAAGSL GSSPNVANYM GQMAMAMGKL GTLESFVRQA DNLRQQTLQQ  300
MYRILTTRQA ARGLLAMGDY FARLRALSSL WSARPRD*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024529114.10.0transcription factor TGA2.3
RefseqXP_024536795.10.0transcription factor TGA2.3 isoform X1
RefseqXP_024536796.10.0transcription factor TGA2.3 isoform X2
SwissprotQ415581e-158HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2R6XAK60.0A0A2R6XAK6_MARPO; Uncharacterized protein
TrEMBLA0A2R6XAL30.0A0A2R6XAL3_MARPO; Uncharacterized protein
TrEMBLA0A2R6XAL50.0A0A2R6XAL5_MARPO; Uncharacterized protein
STRINGPP1S258_7V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-136TGACG motif-binding factor 6