PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0026s0039.5.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bZIP
Protein Properties Length: 410aa    MW: 45506 Da    PI: 8.7824
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0026s0039.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.8e-11106148446
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                          +k+ rr+++NReAAr+sR+RKka++++Le    +L +  ++L+
  Mapoly0026s0039.5.p 106 SKALRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQ 148
                          7999*************************86655555554444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.5E-8103156No hitNo description
SMARTSM003381.1E-4103156IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.473105154IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-7107155No hitNo description
PfamPF001705.0E-8107153IPR004827Basic-leucine zipper domain
PROSITE patternPS000360110125IPR004827Basic-leucine zipper domain
PfamPF141443.7E-34209284IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MLTGMHQQRQ QPNQQQQQQQ SSQVTSPSAA STDSRSAHFT PRRHPSFESP SSRQFEHWGD  60
SRMADNSPRT DTSTDMEADV KLEDAHHGAN AGSNASDHEA TKNGDSKALR RLAQNREAAR  120
KSRLRKKAYV QQLESSRIKL NQLEQELQRA RQQLMTVRGE RVQGVYHLGG YGDQNPHGVG  180
GNGVNGAINP GAAAFDMEYG RWVDEQIRQM CDLRAALQAH VADNELRVLV DGGMAHYDEI  240
FRLKSIAAKA DVFHLVSGMW KTPAERCFMW MGGFRPSELL KILIPQIEPL TEQQLLGICN  300
LQQSSQQAED ALSQGMEALQ QSLADTLAAG SLGSSPNVAN YMGQMAMAMG KLGTLESFVR  360
QADNLRQQTL QQMYRILTTR QAARGLLAMG DYFARLRALS SLWSARPRD*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024529114.10.0transcription factor TGA2.3
RefseqXP_024536795.10.0transcription factor TGA2.3 isoform X1
SwissprotQ415581e-158HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2R6XAL90.0A0A2R6XAL9_MARPO; Uncharacterized protein
STRINGPP1S258_7V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-133TGACG motif-binding factor 6