PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0029s0135.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 588aa    MW: 64116.2 Da    PI: 6.1
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0029s0135.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.49.3e-07508551755
                          HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          ++ r RR+r  +++  L++l+P+      ++l+ +++L ++ eY++ Lq
  Mapoly0029s0135.1.p 508 IAARTRRERFSDRIRILQSLVPNG-----ERLDTVSMLGHTLEYVRFLQ 551
                          5679******************96.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.69E-9496554No hitNo description
PROSITE profilePS5088813.63501550IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.11E-11504562IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.2E-9506563IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-10507556IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 588 aa     Download sequence    Send to blast
MALTANPVPT SVQDAKLLPF HSNGKNESDM WDSYADNVSS HVHHGEDTLT GTPMGTVDHQ  60
QQQQQDKHYP ASTSGLSRNA SFDSVTSHDS CTASFSTGSP VTVLPPLQYT CSGTGMDNSP  120
LNMSTHAGAW PNSFNSSNKR SSPSGLEPSE QQQQQQQHQQ QQHQESIAVD SFWIGHDQML  180
LSEDCEPLLP SPVGTGTLSS MLNEFPFRYD DQACASNCND YTSVNDLECL VPSSLRTNEP  240
SHDQQQQQVV KSPESVGNSN AHSTSPGQQQ QQQQSQQDFC QEFLVGGSEV YSEHNARRSD  300
ASLLSPPAAR RRLSWSEYQV PEPQRHLATS EGLHFAGFGS QAYDHQQHFV PLGDSNAMAP  360
LLPFRGSSCT VQDSGVGASV GGLKRPYSAM MMQPQQQQPA STCSISSSAP TLSHNSYLSK  420
FPSVGPAAPK SAMSNMAPIL SASHGSHHHQ DAAALSALLY KTQGSSEMMQ QLQQQQGQGT  480
SSSDSAARQL PPPKLRRRHG TATDPQSIAA RTRRERFSDR IRILQSLVPN GERLDTVSML  540
GHTLEYVRFL QHQVWQLYNG NDEPAVSADS ESREKWKEFL DAQTVVA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X9640.0A0A2R6X964_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1677723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.16e-19LJRHL1-like 2