PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0032s0007.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

C2H2

Protein Properties

Length: 912aa MW: 100289 Da PI: 9.9527

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0032s0007.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15	7e-05	867	888	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ Cg++F +++Lk+H+r H Mapoly0032s0007.1.p 867 ECGQCGRTF-KPDSLKVHMRGcH 888 5******.********955 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF06136	1.1E-47	17	253	IPR010369	Protein of unknown function DUF966

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005886	Cellular Component	plasma membrane

Sequence ? help Back to Top
Protein Sequence Length: 912 aa Download sequence Send to blast
MVLVGQGMEP EEAFTKVQVV YYLSRGGQLQ QPHLIDVPVS THSNGLYLRD VKRRLTSIRG 60 KGMGDSFSWS CKRNYKNNFI WQDLADDDKI LPLSDGELVL KGSELYTGFQ EKAEFMDGQF 120 DPENASQLPN KIKKLASKKF DFEAVKRSLD MESDKLQEQS DLAAALSLSL QLMSDPHMKR 180 FSKDKSMDLN QQVMNSLSQA KSNAAEECML DHSVTDISSE TLHSEESTVQ KFSFNETIRE 240 RSKSTASASS SGTDREHSYG PPRKTESMGR ERSLPRDLPR SREVSRELPP QVPREAPREK 300 SREMSRELPR EAPRELQLPR EAPRELPREV PRETSRELPR EAPREISREL PREGPREVAR 360 EQPREVVVPR EVVREVSREL PRDVSRDSSK AVKDTAKTRQ EKPEELPTIK TKKSPTCSES 420 GDSTPFMLSP RRLMAALSSP SPEKKFGKLV HSSSTRSSTP STSAASTQCE DSLPNINIRL 480 AKQATCLSNF RLCGNANPHA TDSRPDSPEH PLAAAAQPAS GAVPQSPNTR GHQGGPYWPR 540 WRSGRKPRTS SEGKEGPEPP TPPRGPMTKP VTVAKPDPPL KKSFEFDMNV SGVNSAMATP 600 FLQTENNSPS SSESSSAAVS SGKKPASISL SGTSDASDGG NGASSTASSS SEVQNNVSVK 660 EVITQQLPSP SSSEGRPSLN IDTASLPRVS ISEAISDVRE TVKTTRPDSP ESPMKPNPPS 720 SPVRTQLSSS PSFNKRIEDA RARARSLVSK EIRSGESRSS KDLLKENDRV KTSSGSMRSG 780 STRTPNNKNG TTGAGSKTLS GTFNRSPPRI NSIMWEDAPL TPTKKEFVNR DDRPLTAGRT 840 NLDWEKTLQE AASLSLPPPD FGQILQECGQ CGRTFKPDSL KVHMRGCHAL RRSKDFQPFN 900 GTSVAIRTRL Q*

Sequence ? help Back to Top

Protein Sequence Length: 912 aa Download sequence Send to blast

MVLVGQGMEP EEAFTKVQVV YYLSRGGQLQ QPHLIDVPVS THSNGLYLRD VKRRLTSIRG  60
KGMGDSFSWS CKRNYKNNFI WQDLADDDKI LPLSDGELVL KGSELYTGFQ EKAEFMDGQF  120
DPENASQLPN KIKKLASKKF DFEAVKRSLD MESDKLQEQS DLAAALSLSL QLMSDPHMKR  180
FSKDKSMDLN QQVMNSLSQA KSNAAEECML DHSVTDISSE TLHSEESTVQ KFSFNETIRE  240
RSKSTASASS SGTDREHSYG PPRKTESMGR ERSLPRDLPR SREVSRELPP QVPREAPREK  300
SREMSRELPR EAPRELQLPR EAPRELPREV PRETSRELPR EAPREISREL PREGPREVAR  360
EQPREVVVPR EVVREVSREL PRDVSRDSSK AVKDTAKTRQ EKPEELPTIK TKKSPTCSES  420
GDSTPFMLSP RRLMAALSSP SPEKKFGKLV HSSSTRSSTP STSAASTQCE DSLPNINIRL  480
AKQATCLSNF RLCGNANPHA TDSRPDSPEH PLAAAAQPAS GAVPQSPNTR GHQGGPYWPR  540
WRSGRKPRTS SEGKEGPEPP TPPRGPMTKP VTVAKPDPPL KKSFEFDMNV SGVNSAMATP  600
FLQTENNSPS SSESSSAAVS SGKKPASISL SGTSDASDGG NGASSTASSS SEVQNNVSVK  660
EVITQQLPSP SSSEGRPSLN IDTASLPRVS ISEAISDVRE TVKTTRPDSP ESPMKPNPPS  720
SPVRTQLSSS PSFNKRIEDA RARARSLVSK EIRSGESRSS KDLLKENDRV KTSSGSMRSG  780
STRTPNNKNG TTGAGSKTLS GTFNRSPPRI NSIMWEDAPL TPTKKEFVNR DDRPLTAGRT  840
NLDWEKTLQE AASLSLPPPD FGQILQECGQ CGRTFKPDSL KVHMRGCHAL RRSKDFQPFN  900
GTSVAIRTRL Q*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6X6S3	0.0	A0A2R6X6S3_MARPO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP645	2	4

Link Out ? help Back to Top
Phytozome	Mapoly0032s0007.1.p