PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0035s0049.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family NAC
Protein Properties Length: 499aa    MW: 54917.4 Da    PI: 7.335
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0035s0049.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.83.2e-51141441128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                          lppGfrFhPtdeelv +yL +k+e+  ++l  vi++vd+yk++PwdLp k+  +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk
  Mapoly0035s0049.1.p  14 LPPGFRFHPTDEELVLHYLGPKAEAYVFNL-PVIADVDLYKHDPWDLPDKAIFGEREWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDK 102
                          79*************************999.89***************7767799*********************************** PP

                  NAM  91 evlskkgel....vglkktLvfykgrapkgektdWvmheyrl 128
                          +++++k+ +    +g+kk Lvfykgrapkg+kt+W+mheyrl
  Mapoly0035s0049.1.p 103 PIYRTKDVKtpikIGVKKALVFYKGRAPKGVKTNWIMHEYRL 144
                          ****844445666***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-6210174IPR003441NAC domain
PROSITE profilePS5100559.69314174IPR003441NAC domain
PfamPF023659.1E-2715144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009737Biological Processresponse to abscisic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MVMAAKGPAS SLILPPGFRF HPTDEELVLH YLGPKAEAYV FNLPVIADVD LYKHDPWDLP  60
DKAIFGEREW YFFSPRDRKY PNGARPNRAA GSGYWKATGT DKPIYRTKDV KTPIKIGVKK  120
ALVFYKGRAP KGVKTNWIMH EYRLAENGIS PTHHVHRKGS LRLDDWVLCR IYKKSTNAQR  180
TGKERESSSC VEEVLASLPE IDNPRIMLPR LEQTFSGLMD QDLQTIQNMG SPLMDSFLTG  240
DGSEIGSPNP PEQVESPPDA RSSALQQQQQ QQGGHGTSLQ PKIEPMTHDR VNLNAEQHPL  300
NHSAMVGELG PNNSGAHNAW RPSKDFMQMM SSELFLESHL RQSPPELLDM EDEAQSSYRA  360
SLASTLNYAS GGALNRLHHH SSASSTNNNA GNISSFATAP YLDLQHRSHH DDGTLGSIHA  420
HFTSAGPGNL LSMSMGANAG AMGTSSGTST AYVPSLNHFQ NQQQHNMNLA RQSTAAPVYF  480
DLAHSSNLNH ELTAGRGR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-7711804171NO APICAL MERISTEM PROTEIN
1ut4_B4e-7711804171NO APICAL MERISTEM PROTEIN
1ut7_A4e-7711804171NO APICAL MERISTEM PROTEIN
1ut7_B4e-7711804171NO APICAL MERISTEM PROTEIN
3swm_A5e-7711807174NAC domain-containing protein 19
3swm_B5e-7711807174NAC domain-containing protein 19
3swm_C5e-7711807174NAC domain-containing protein 19
3swm_D5e-7711807174NAC domain-containing protein 19
3swp_A5e-7711807174NAC domain-containing protein 19
3swp_B5e-7711807174NAC domain-containing protein 19
3swp_C5e-7711807174NAC domain-containing protein 19
3swp_D5e-7711807174NAC domain-containing protein 19
4dul_A4e-7711804171NAC domain-containing protein 19
4dul_B4e-7711804171NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024369623.11e-121NAC domain-containing protein 2-like
TrEMBLA0A2R6X5760.0A0A2R6X576_MARPO; Uncharacterized protein
STRINGPP1S140_93V6.11e-120(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.27e-84NAC family protein