PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0035s0081.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

NF-YB

Protein Properties

Length: 223aa MW: 25444.5 Da PI: 4.3591

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0035s0081.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	30.4	9.5e-10	109	156	49	96
NF-YB 49 easdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 a d c +e+rk ++ +d++ a lGfe+++eplk+y++++ ++++e Mapoly0035s0081.1.p 109 RAIDTCYQEQRKIMDFEDVMQAARCLGFEKFLEPLKKYMQEHAHFKTE 156 5889************************************99988876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.20.10	1.1E-9	109	160	IPR009072	Histone-fold
SuperFamily	SSF47113	7.67E-7	109	161	IPR009072	Histone-fold

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence Send to blast
MEERVSPLNS GGKMEISSSE ESVMAPQVDR RDLIDFLCGE ELTDADSQDR ESTSNSESCC 60 KNKEDFFKQQ RELGLAVMIK SRNESFEVTP GTELENIIAD IILPRSVARA IDTCYQEQRK 120 IMDFEDVMQA ARCLGFEKFL EPLKKYMQEH AHFKTEESVS SGNGAAYDEF FNLKAEEDDA 180 CTDVPGYDDW YKNVQDLMAM VHNNCCRSCP CRIVKFTREN YK*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6X5F2	1e-165	A0A2R6X5F2_MARPO; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38880.7	5e-10	nuclear factor Y, subunit B1

Link Out ? help Back to Top
Phytozome	Mapoly0035s0081.1.p