PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0035s0081.2.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

NF-YB

Protein Properties

Length: 162aa MW: 18606 Da PI: 4.5351

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0035s0081.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	31.2	5.3e-10	48	95	49	96
NF-YB 49 easdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 a d c +e+rk ++ +d++ a lGfe+++eplk+y++++ ++++e Mapoly0035s0081.2.p 48 RAIDTCYQEQRKIMDFEDVMQAARCLGFEKFLEPLKKYMQEHAHFKTE 95 5889************************************99988876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47113	2.09E-7	47	100	IPR009072	Histone-fold
Gene3D	G3DSA:1.10.20.10	4.9E-10	48	100	IPR009072	Histone-fold

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence Send to blast
MEERVSPLNS GGKMEISSSE ESVMAPQVDR RDLIDFLCDI ILPRSVARAI DTCYQEQRKI 60 MDFEDVMQAA RCLGFEKFLE PLKKYMQEHA HFKTEESVSS GNGAAYDEFF NLKAEEDDAC 120 TDVPGYDDWY KNVQDLMAMV HNNCCRSCPC RIVKFTRENY K*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6X5B7	1e-118	A0A2R6X5B7_MARPO; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38880.7	1e-10	nuclear factor Y, subunit B1

Link Out ? help Back to Top
Phytozome	Mapoly0035s0081.2.p