PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0036s0129.2.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 452aa    MW: 49681.4 Da    PI: 5.9522
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0036s0129.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY55.71e-17370424359
                          -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          DgynWrKYG  +v g + pr +Y Ct  gC ++k +e  + d+  v   Yeg Hnh+
  Mapoly0036s0129.2.p 370 DGYNWRKYGEMTVPGHTLPRVFYGCTNIGCIARK-IEERT-DEGNVRHFYEGVHNHP 424
                          9********************************9.77777.56678889*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081119.347363426IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.8E-15366426IPR003657WRKY domain
SuperFamilySSF1182901.31E-16368426IPR003657WRKY domain
SMARTSM007742.6E-10368425IPR003657WRKY domain
PfamPF031061.3E-13370424IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MDNYGGGDDM ALGIVSRDPA ELFESNCSTI IVKREYCSKD DEDFVDVNGP FLCIKKEKDD  60
IDHPILLTND VDTSQIFEVK PLDPEIGSEQ QIGSNGELLV VWQEREPSAE RGSERLWVRK  120
DPQCEVWSCK MSATYGHSTG PSRCSQHREA WMVMFGHCAV DGCTKFGVVV SSEDEPVRCE  180
AHAATTEETV LRPKQTSRPL EHLAGLSRVG PSGLGLGLGL GDDSRAHEVS SARSQVLDSG  240
PVIGESSANA QDGQVVAEIG SVPPSGNHPS PPELNGTPHM SVEAEINRLK EEHEGLRQRM  300
VQIEIELARL EGSRNRESQA QEAPAKRAVQ QRPRQLATCQ ETPTSKVSAN INDGKNGSSP  360
SNAPGKVSLD GYNWRKYGEM TVPGHTLPRV FYGCTNIGCI ARKIEERTDE GNVRHFYEGV  420
HNHPQPGKSF PRPVSIPHWK RRKRHHTVCT D*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X4Y60.0A0A2R6X4Y6_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.22e-14WRKY family protein