PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0037s0099.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

Trihelix

Protein Properties

Length: 440aa MW: 48719.7 Da PI: 6.9651

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0037s0099.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.5	3e-12	169	248	2	74
trihelix 2 WtkqevlaLiearr....emeerlrrg..klkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtse 74 W e+l+Li+a++ + + + +r+ + +++ +++ ++mr++ + r ++ Ck+kwe l+++yk ike+++k ++ Mapoly0037s0099.1.p 169 WEAWEILLLIQAKKaefeRYWGHPGRErlENSAQKYKRIVDYMRQHRVmDRDATACKNKWEALSGEYKVIKEWDRKPGNP 248 9999********5555444444444236789******9998879**********************995444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	1.2E-8	167	247	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence Send to blast
MDDESAFIDL ATPAEDPVVS VPSAHSGGST IRSNAASPTE CVAGVHHGAA TNSTAQSAIT 60 RTGTSPLGPM HLPPNSPSLL PLSPHIPCLC MAPPVQAMTN YVAMPFHASH SMHGTHQPHI 120 PPVVFPSMTS PALQQRQESQ SLVQERDSST FENHHSGPAS RTRKRSRNWE AWEILLLIQA 180 KKAEFERYWG HPGRERLENS AQKYKRIVDY MRQHRVMDRD ATACKNKWEA LSGEYKVIKE 240 WDRKPGNPTY SSLSFQERKQ NNLPTSFETE AQELMDSFQG SRQHMVPPSV VDSTIRHSMS 300 AGGTRAITVV PPGADSTVRH SPSAGDGGEG STAEDEREQV PPTEEPEHIE IWASGKRKKS 360 CGNVVAAFQE LSQSIMRIEK ERADRAREAN EMAKDAHLLE MRKFEFLQMK MDREDERAEK 420 FVGVLGSIAG AFHKMAEKM*

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence Send to blast

MDDESAFIDL ATPAEDPVVS VPSAHSGGST IRSNAASPTE CVAGVHHGAA TNSTAQSAIT  60
RTGTSPLGPM HLPPNSPSLL PLSPHIPCLC MAPPVQAMTN YVAMPFHASH SMHGTHQPHI  120
PPVVFPSMTS PALQQRQESQ SLVQERDSST FENHHSGPAS RTRKRSRNWE AWEILLLIQA  180
KKAEFERYWG HPGRERLENS AQKYKRIVDY MRQHRVMDRD ATACKNKWEA LSGEYKVIKE  240
WDRKPGNPTY SSLSFQERKQ NNLPTSFETE AQELMDSFQG SRQHMVPPSV VDSTIRHSMS  300
AGGTRAITVV PPGADSTVRH SPSAGDGGEG STAEDEREQV PPTEEPEHIE IWASGKRKKS  360
CGNVVAAFQE LSQSIMRIEK ERADRAREAN EMAKDAHLLE MRKFEFLQMK MDREDERAEK  420
FVGVLGSIAG AFHKMAEKM*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6X498	0.0	A0A2R6X498_MARPO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP12351	2	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	5e-10	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Mapoly0037s0099.1.p