PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0038s0058.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 731aa    MW: 76495.6 Da    PI: 6.2995
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0038s0058.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.3e-08542589455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  Mapoly0038s0058.1.p 542 SHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 589
                          8*************************9....556*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.70E-11536593No hitNo description
SuperFamilySSF474597.46E-17536607IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16538605IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.669538588IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-5542589IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.6E-10544594IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 731 aa     Download sequence    Send to blast
MASMGQADHL PTPCHLNGIS RLNCSPPTGA LNSTPISSFS NALAANDYRE KYTMEMHSGY  60
GRFFRNGSSG YGNQPSEMAQ VWQLAGPAAE MHALAQQENS MRAAAAANGM VANECGSDAA  120
SRGSPGLLPT SSSELYGSTV VSGDWDQFVD SSVRYQSVLS SSSSPLSHNS PHAGGSRAAN  180
EGAMIRELIG RLGGNGNGVA SLGGSPLVAS PQRSGTGMDK ALKLATGWGS GDAANSMGLT  240
VDPSKGALAL PGVGLAASHC LAHFASDPGF AERAARFSSF SNGNYSQPFP TSDGGKARSR  300
QGSAQSSDAT NNRQLPKTSS CPSMSDTAAG AKSPKDDPAS SDIDDPAPEP GAGAAGAGAD  360
MEQYARDGDV GVKAGDKNLC RTASSVAAGD DDERMQAASP VDEANDADEA TTVAQDMSSV  420
GDAPGETCPS GVTHVTTATE NLVKKRKSTP DEKSKDATSV TVSSPGVRET KTSDSDDVKA  480
KRFKRGDASK DKDDVKPKVE RSSSETSGET SPRSTKDHSK PQEPPKPDYI HVRARRGQAT  540
DSHSLAERVR REKISERMKF LQDLVPGCSK VTGKAVMLDE IINYVQSLQH QVQFLSMKLA  600
AVNPRLDFNI ENLLAKEVSR SQGMIMGPET SYPQLHPPHQ PQLQHGVPCG LEYPVQSLGN  660
PSQVALRRSI SAPIPAVIPR EDGFADGVPT GVWDDGELQS IVMGFGQLRS LSSQALLHGH  720
LPPGHMKVEL *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176VHX50.0A0A176VHX5_MARPO; Uncharacterized protein
TrEMBLA0A2R6X3M60.0A0A2R6X3M6_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5816313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.11e-50bHLH family protein