PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0040s0116.2.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 311aa    MW: 34703.4 Da    PI: 6.5713
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0040s0116.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.15.6e-2182146259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.......T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.......gCpvkkkversaedpkvveitYegeHnhe 59 
                          +Dg+ WrKYG K++k + f +sYYrC ++       +C++kk v+++++dp+++++ Yeg+H ++
  Mapoly0040s0116.2.p  82 EDGFLWRKYGSKNIKMAAFKKSYYRCNHPcshstakKCTAKKTVQQKDDDPHLLQVAYEGSHSCK 146
                          7************************977666667779*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-2271146IPR003657WRKY domain
PROSITE profilePS5081118.34976148IPR003657WRKY domain
SuperFamilySSF1182902.35E-1979146IPR003657WRKY domain
SMARTSM007741.0E-2481147IPR003657WRKY domain
PfamPF031061.4E-1982146IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MGNSTQHMNT FFMSPSSLVE PAHTWNTSAE ALDAISPAVN ITPTLKTVKT TKKKNRQRER  60
KNKKPQTPLH VVNAENDGKV PEDGFLWRKY GSKNIKMAAF KKSYYRCNHP CSHSTAKKCT  120
AKKTVQQKDD DPHLLQVAYE GSHSCKAALE FQRGSSTEDP DKAESLNLDD QMSSRANARH  180
NPDPASEWSH IVNPVRTSSG SFSAVSEDGN DQSEEGDGNN SSVSRKDGLG NVHALPEFDI  240
ELDIDPIQDW PDCPDFKMFQ GTRSYVDQTD IIEDHAKVLL ENIMRPCSPG FQFGAIETLN  300
DIQNWHGHYR *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176W7X30.0A0A176W7X3_MARPO; Uncharacterized protein
TrEMBLA0A2R6X2W00.0A0A2R6X2W0_MARPO; Uncharacterized protein
TrEMBLA0A2R6X2Y90.0A0A2R6X2Y9_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.23e-16WRKY DNA-binding protein 57