PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0041s0104.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

Trihelix

Protein Properties

Length: 345aa MW: 37942.2 Da PI: 5.2227

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0041s0104.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34.7	4.8e-11	96	167	1	68
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikege 68 +Wt v +L+ea++e+ ++++g+lk+++Weev+ + + + ++ kqCk k l++ y+ i++++ Mapoly0041s0104.1.p 96 EWTPAAVIVLLEAYEERLGEVNNGNLKAKDWEEVATLVnrhcQGTRSIVGVKQCKRKVYALRRWYRTIRTRQ 167 5*********************************995532333334589*************999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.0E-10	95	167	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence Send to blast
MMETMESLGL GEADDEVRVG SLVAEVREIS MADRIDDGMG SEECLKLWME AEANCDAGRE 60 HRMDGMQMDR LPSADDVGLV ENVMQPQSPV TWEKEEWTPA AVIVLLEAYE ERLGEVNNGN 120 LKAKDWEEVA TLVNRHCQGT RSIVGVKQCK RKVYALRRWY RTIRTRQAPY RPVGYEVNVL 180 MVLDRIMTPY PYQAGIPGGI DAGERLSFPT PSSFDEEEDL PAAEQGHGFG GCVTPQLGKR 240 QRNPAEGNPV IAAIPLPPKS ARGSGSGNGA ARKKAARKGF WGPGEEVATA LKGFAKVLTQ 300 IEVAKKNIMK DLDVRRSELQ LKLAAFKPYP EDGPPKAPQQ PQVI*

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence Send to blast

MMETMESLGL GEADDEVRVG SLVAEVREIS MADRIDDGMG SEECLKLWME AEANCDAGRE  60
HRMDGMQMDR LPSADDVGLV ENVMQPQSPV TWEKEEWTPA AVIVLLEAYE ERLGEVNNGN  120
LKAKDWEEVA TLVNRHCQGT RSIVGVKQCK RKVYALRRWY RTIRTRQAPY RPVGYEVNVL  180
MVLDRIMTPY PYQAGIPGGI DAGERLSFPT PSSFDEEEDL PAAEQGHGFG GCVTPQLGKR  240
QRNPAEGNPV IAAIPLPPKS ARGSGSGNGA ARKKAARKGF WGPGEEVATA LKGFAKVLTQ  300
IEVAKKNIMK DLDVRRSELQ LKLAAFKPYP EDGPPKAPQQ PQVI*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6X2B2	0.0	A0A2R6X2B2_MARPO; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.2	4e-14	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Mapoly0041s0104.1.p