PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0048s0104.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

S1Fa-like

Protein Properties

Length: 86aa MW: 9185.77 Da PI: 10.6282

Description

S1Fa-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0048s0104.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	S1FA	106.7	1.2e-33	21	84	6	69
S1FA 6 veakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPG 69 + +G+nP livllvv g +lvf+vgny+l+ ya+k+lPPrkkkPvskkklkre+lk Gva+ G Mapoly0048s0104.1.p 21 APDQGFNPALIVLLVVVGTVLVFIVGNYALFSYAKKTLPPRKKKPVSKKKLKRERLKAGVAPAG 84 5568*********************************************************988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04689	3.7E-31	23	84	IPR006779	DNA binding protein S1FA

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 86 aa Download sequence Send to blast
MAEEDFDASS FTSQGTFSTK APDQGFNPAL IVLLVVVGTV LVFIVGNYAL FSYAKKTLPP 60 RKKKPVSKKK LKRERLKAGV APAGD*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010104121.2	2e-23	DNA-binding protein S1FA
Refseq	XP_024026346.1	2e-23	DNA-binding protein S1FA
TrEMBL	A0A2R6WYU0	2e-53	A0A2R6WYU0_MARPO; Uncharacterized protein
STRING	XP_010104121.1	3e-23	(Morus notabilis)

Link Out ? help Back to Top
Phytozome	Mapoly0048s0104.1.p