PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0055s0052.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 311aa    MW: 34669.5 Da    PI: 6.7637
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0055s0052.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.000131902281255
                          HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          R +++ +++  L++l+ +      +K + a++L +A+ YIk Lq
  Mapoly0055s0052.1.p 190 RKEKLGERITALQQLVSPF-----GKTDTASVLLEAIGYIKFLQ 228
                          6677888999999999998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.407178227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.02E-11188242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0024189233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.58E-6190232No hitNo description
Gene3DG3DSA:4.10.280.101.8E-8192235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MATLASSIPV WAHLLTSDSG VVEHGQLPRS TSDAFTDCGS SPLSQHWETH EMDYSSHFII  60
PPQAHLTSNS HMSPLQWANA PDAAHHASLL QHCSDYQQQQ QQQQQQQLEI AHHQQQQDQH  120
PHLLRQAKSH VNHLADSHED SRDSKRPAPS MGAQEELANS EAFIKRPRLE QQQQQQQQQT  180
PNVPFKMQVR KEKLGERITA LQQLVSPFGK TDTASVLLEA IGYIKFLQEQ VQVLSTPYMK  240
SNVGPSSMHH DNPHDVSKMG WASTKVKSQD DARQDLRSRG LCLVPVSCTL QVANDNGADF  300
WTPAIGGSCR *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024537458.16e-59transcription factor bHLH68 isoform X1
TrEMBLA0A2R6WV930.0A0A2R6WV93_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP13421337
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.13e-40bHLH family protein