PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0061s0011.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

C2H2

Protein Properties

Length: 103aa MW: 11276.8 Da PI: 7.1225

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0061s0011.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.2e-05	16	38	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F + L H+++H Mapoly0061s0011.1.p 16 YTCSFCRREFCTAQALGGHMNVH 38 9********************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	6.66E-6	13	39	No hit	No description
PROSITE profile	PS50157	9.452	16	38	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	18	38	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence Send to blast
MLSTCCCSGQ WPPRSYTCSF CRREFCTAQA LGGHMNVHRL KCAEANEVAL HLHLRHHQTL 60 APAPPPCRSR LEAAAASVPS EHENLDLELR LGTSDSFPYA TD*

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may regulate cell division and growth. {ECO:0000269\|Ref.4}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Swissprot	Q9SLB8	7e-15	ZFP11_ARATH; Zinc finger protein 11
TrEMBL	A0A2R6WS97	5e-69	A0A2R6WS97_MARPO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP576	15	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42410.1	3e-17	zinc finger protein 11

Link Out ? help Back to Top
Phytozome	Mapoly0061s0011.1.p