PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0070s0029.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family NAC
Protein Properties Length: 344aa    MW: 39997.3 Da    PI: 7.2212
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0070s0029.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.21.3e-0912921913109
                  NAM  13 elvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy.Wkatgkdkevlskkgelvg 101
                          +lv e+L++  +  + +    i e+d+y+++P+ L     +++++ yf ++++ + ++  r+ r+t++g  W+++g++ ++ + +g  v 
  Mapoly0070s0029.1.p 129 QLV-EHLREWKRIPNKKR-ALIGEADVYETHPEVLM----KGSSSSYFITSTRYTLSQRPRRLRKTENGCrWRQQGRSYPIND-NGIPVA 211
                          566.77777666655444.67**************6....3457889999998888888888888988866***********9.999*** PP

                  NAM 102 lkktLvfy 109
                           k+ L + 
  Mapoly0070s0029.1.p 212 YKTYLSYV 219
                          *****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-9128220IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MCAKSSRLTL NLLLDLQELE HFMHLPFNQL TAIATVNMAD TLSDFIAAFF NQKQHDPMEV  60
VLGCNKRFEK IEQEDEEALT FESHSSERYS DDGAIVEMPI RNLQQSFTES RGETKRFNRS  120
EMRKMSEMQL VEHLREWKRI PNKKRALIGE ADVYETHPEV LMKGSSSSYF ITSTRYTLSQ  180
RPRRLRKTEN GCRWRQQGRS YPINDNGIPV AYKTYLSYVP LKDTLNRQTL STLGYEAPDI  240
NFFVTKDESN DDSLLRAHKK KEVRKWAIWT MEEIVLAEDL DLEKVLLQNN QKPDPVPMIC  300
RILCKRDSRS SRRSSVDHES VNSNSSSSLK VKTEEEYSVY FQA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WNY10.0A0A2R6WNY1_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1883922