PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0070s0093.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family HRT-like
Protein Properties Length: 453aa    MW: 49765.6 Da    PI: 10.4647
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0070s0093.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like482e-15306334230
             HRT-like   2 CGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                          CGv++ dGs C+++PvkgR RC eHKG R
  Mapoly0070s0093.1.p 306 CGVLMADGSKCSKPPVKGRRRCSEHKGLR 334
                          ***************************99 PP
2HRT-like53.15.1e-17395425131
             HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                          +CGv+l+ GsvC ++P+k+RKRC++HKGmR+
  Mapoly0070s0093.1.p 395 VCGVTLDGGSVCLNEPIKDRKRCAAHKGMRT 425
                          7*****************************5 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:2000033Biological Processregulation of seed dormancy process
GO:0097100Molecular Functionsupercoiled DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MGPPSVGFTT RKVAAAQFQK AEKERLKRED CHRVKHDKLF SDWKILVGST DWRTHAAEEE  60
GSQRYRLHNL PATYFGPGVY ELGLTLQNLS APREAKPRKL RKQDVVVVYL GQAENVRQRL  120
QKYGQSGSHL EGARLVPGAA VEHCEYDDGM TSPSPAKARA KADGSTGGST ERGLRLFTEV  180
FSRGYSIVFR WARTESKQMA EKVESELLHV FDYPWNRGLN GARRPDDILA RLELMQYHLE  240
QSLCLGRFLG AGREKWTVFH RKVGIKVPVE RPSEEGSAGS SRFSIFRASS KDGLPNALPN  300
SADSHCGVLM ADGSKCSKPP VKGRRRCSEH KGLRAKLTTR RARTAKSKTG DCGRNPSIPS  360
ESYGGHKGEP PVLVVKSTPN GKRLELSEAP SDGLVCGVTL DGGSVCLNEP IKDRKRCAAH  420
KGMRTGGKAT GSPISIHLST HTPARKTNHV VR*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WP820.0A0A2R6WP82_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP52481420
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.16e-58effector of transcription2