PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0072s0031.2.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family BES1
Protein Properties Length: 600aa    MW: 65419.3 Da    PI: 5.0545
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0072s0031.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822151.75.7e-47431652124
               DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91 
                          +  r+p+ +ErEnnk+RERrRRa+aa+i+aGLR++Gny+lpk+aD neVlkALc+eAGw+ve+DGt yr+g k +e ++  ++s+ ++++
  Mapoly0072s0031.2.p  43 SVLRMPSPRERENNKKRERRRRAVAARIFAGLRQYGNYRLPKHADHNEVLKALCAEAGWIVEEDGTIYRQGHKTPELKADLQESEVINVN 132
                          5679***********************************************************************888888888886665 PP

               DUF822  92 sslqsslkssalaspvesysaspksssfpspss 124
                             + +  +     p ++    + + s+ps+s 
  Mapoly0072s0031.2.p 133 CTCEIQEAALDSDGPESALDRFKYETSTPSSSC 165
                          554433333333334444444444444444433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056876.7E-4446175IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009742Biological Processbrassinosteroid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    Send to blast
MANRAAEASS SYNFKVRGCI KSTSGPWIVR RPPTKNSGRG ATSVLRMPSP RERENNKKRE  60
RRRRAVAARI FAGLRQYGNY RLPKHADHNE VLKALCAEAG WIVEEDGTIY RQGHKTPELK  120
ADLQESEVIN VNCTCEIQEA ALDSDGPESA LDRFKYETST PSSSCGQSDE TTCSIRSRNS  180
GRNNCDQPTV AGICDYDLNL SGTEGDYEEL DQVAVENEES TVMMSGLPEP KNLETSAEDC  240
DTNIEFFINP ESRPMNLPKS ERSTGECNAS YHQEFQFFAG LFPGPSDLLT AALAVADDTP  300
SCCVRPTRDL NSPPIFEGST STEFPNAVNC SLPPAPSMDN TFIKKESYND QIYLKNMGRQ  360
DSTWIPACND HNGRSGDADS SPSSSDTPEL ELLSSGDVMI DSTSPCRMDA GRVSCSDASD  420
CPCAISDETP LQSSVSNGLL IARNYRVPPV SYAGPDQGYL LDRKNGSSSA LSNQRSMQST  480
REYSNWNDLT HRASGRGGQT AAATNIGHHQ SVSITTAASK PFDKTALYEF SPGTDFHGQN  540
KQQYRGPLIL PPKQQQLQSA PPVDALSLTL CTSTGSTGLS SEYPFCFIKR HIKLPIPQT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-1646115372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-1646115372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-1646115372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-1646115372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00073ChIP-chipTransfer from AT1G19350Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176VHR60.0A0A176VHR6_MARPO; Uncharacterized protein
TrEMBLA0A2R6WN420.0A0A2R6WN42_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.68e-22BES1 family protein