PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0079s0062.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

GRAS

Protein Properties

Length: 80aa MW: 9049.39 Da PI: 6.5082

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0079s0062.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	46.3	7.1e-15	3	75	251	319
GRAS 251 esFlerflealeyysalfdsl.eaklpres...eerikvErellgreivnvvacegaerrerhetlekWrerl 319 + Fl rf+ea +y+s+ dsl + l++ s er vEr +lgrei++ v g++r+erh+t+ +W + Mapoly0079s0062.1.p 3 QGFLPRFVEAKHYFSSTVDSLpACLLASLSsslAEREIVERLVLGREICKSVGSDGDQRVERHRTVDRWMLYM 75 68*****************7666666656679*********************************7655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50985	11.492	1	79	IPR005202	Transcription factor GRAS
Pfam	PF03514	2.3E-12	3	75	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 80 aa Download sequence Send to blast
MEQGFLPRFV EAKHYFSSTV DSLPACLLAS LSSSLAEREI VERLVLGREI CKSVGSDGDQ 60 RVERHRTVDR WMLYMGFQL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6WL20	5e-51	A0A2R6WL20_MARPO; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14920.1	8e-10	GRAS family protein

Link Out ? help Back to Top
Phytozome	Mapoly0079s0062.1.p