PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0090s0001.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 222aa    MW: 25213.4 Da    PI: 8.6564
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0090s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-184190255
                  AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          ykGVr++  +g+WvAeIrd +    kr r++lg+f t+eeAa+a+++  ++++g
  Mapoly0090s0001.1.p 41 EYKGVRQRT-WGKWVAEIRDpW----KRIRVWLGSFNTKEEAAAAYDRKVLEFFG 90
                         69****999.**********77....26********************9999877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.09E-2640100No hitNo description
SMARTSM003804.2E-2841104IPR001471AP2/ERF domain
PfamPF008472.3E-104184IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-204198IPR016177DNA-binding domain
PROSITE profilePS5103220.4954198IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-264199IPR001471AP2/ERF domain
PRINTSPR003672.3E-94253IPR001471AP2/ERF domain
PRINTSPR003672.3E-96480IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MLSRFKATSR QRMTKGEKVL HKKWSKASSR GRGGSENFSC EYKGVRQRTW GKWVAEIRDP  60
WKRIRVWLGS FNTKEEAAAA YDRKVLEFFG PNAHFNLQSS PAALQSNQNT VFTPLFSVPL  120
QTLISKTDSY SQPQVSEISE PLKTEAFYTN SNSNKTLDSF IPLEVKGVNK SEELPPLEVE  180
VTPLDTDFKN LDKEPYFDFA SLLDLDEVLS CRTNLSETER S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-144297359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WHB41e-162A0A2R6WHB4_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.11e-30ERF family protein