PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0090s0091.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family MYB_related
Protein Properties Length: 106aa    MW: 12350.6 Da    PI: 4.4517
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0090s0091.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.25.9e-111159148
                         TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                         + +WT++Ede+l +  +      +W+ +++  g+ R++k+c+ rw+ ++
  Mapoly0090s0091.1.p 11 KRPWTQDEDEQLCRFMTNNDQAlCWEEVPKLAGLLRSGKSCRTRWNYLR 59
                         579****************988***********99**********9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.873662IPR017930Myb domain
SMARTSM007171.3E-51061IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.0E-121061IPR009057Homeodomain-like
SuperFamilySSF466892.86E-91178IPR009057Homeodomain-like
PfamPF002491.1E-81158IPR001005SANT/Myb domain
CDDcd001671.58E-41358No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
MGSTGHMKKK KRPWTQDEDE QLCRFMTNND QALCWEEVPK LAGLLRSGKS CRTRWNYLRP  60
RAREFMGLEL FGQWGEMSDE VDQPMSDESD ETKSYYDDDE QSAES*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176W4C52e-72A0A176W4C5_MARPO; Uncharacterized protein
TrEMBLA0A2R6WHM02e-72A0A2R6WHM0_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.15e-17myb domain protein 20