PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0091s0012.2.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family MYB_related
Protein Properties Length: 826aa    MW: 95703.1 Da    PI: 9.0195
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0091s0012.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.94.9e-13339381247
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          grW +eE e+l+++v+++G++ W+tIa ++g  R+   c  +w++ 
  Mapoly0091s0012.2.p 339 GRWDAEETERLKRLVQKHGNN-WTTIACHLG--RSNGACARKWRSI 381
                          9******************99.********8..**********975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM0071731259335IPR001005SANT/Myb domain
PROSITE profilePS500905.482276333IPR017877Myb-like domain
PROSITE profilePS5129414.875333386IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.5E-12337381IPR009057Homeodomain-like
SuperFamilySSF466891.58E-9337381IPR009057Homeodomain-like
SMARTSM007171.2E-9337384IPR001005SANT/Myb domain
CDDcd001678.38E-6340381No hitNo description
PfamPF139215.7E-13341401No hitNo description
Gene3DG3DSA:1.10.10.602.4E-4390456IPR009057Homeodomain-like
PROSITE profilePS500906.121390454IPR017877Myb-like domain
SMARTSM007170.28390456IPR001005SANT/Myb domain
SuperFamilySSF466898.71E-5440520IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.0E-4467519IPR009057Homeodomain-like
SMARTSM0071732467518IPR001005SANT/Myb domain
PROSITE profilePS500905.657471516IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 826 aa     Download sequence    Send to blast
MGRKRNSRDD SGENGHADQE TPVEEVERQY CEFSKYSTSL PDLQAGKSRR SKSSRKSLTW  60
KEEAKKRSTE CLNYNPSTPE AKMKKPLVLD FNHSEERGPD TRNTPIGEVN KKSSFSSKFP  120
VRTSTLEMGT RKSRNYSGVP GPEYASSLPR EINRGIRDSE VSMCTPEERS LSTPSTGLDH  180
EATLIHKTKR RMTEESEPPL FTPLSQIRGR DAHCIPLTVK LAKSQKKLFC GPDDKAKRCK  240
DDDEEERGWA SDRRRKDLDH GKFTEDEIIS LNCGLNQLME ARNWTREEAA KILTHQSGRG  300
NPHAEARGAW KEIAKFLPSS SIVRVNMKVR ELLFKGKTGR WDAEETERLK RLVQKHGNNW  360
TTIACHLGRS NGACARKWRS IRTDECTFRK RGKWTQDEYD ELCRHVRDAK ATKIFKSTKR  420
IGKRKVRDDL CWEPIALRMC RPANQCSAVW YERLAPSMHK ELCLDEKDRQ WSDEDDRRLL  480
TRMLRLMSPH GSICWRKVYL KNRKTATCKA RFNQMTHPKC LGEKHEATLH EKLEILVRRY  540
APDLTVQNPI GGLDESRIHL VEEMIKRHDS ESDFDITESR REEYEWTMNT FGSDDRRSTY  600
KSRAAHSQGC GDQQEDNILP LRMEKEVDCR VRGTPGFETK RSKDQRKIER ESTPSGYKFE  660
ENDNLSANDS MGRESEWGWS SPRRKEEDEY SVHCAECDLD PVSQHRPRVQ ERKTVSRYIV  720
YNSNQRNLDL VRETREDSSV KDVRVSRKCC TRPSSETSYS LECQNCDRKN GGNFFYNLTK  780
HDRSKNKTTF YRVEQGNQCT SVGLKDGKTV RESSYTDDES TSLDF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WH140.0A0A2R6WH14_MARPO; Uncharacterized protein
TrEMBLA0A2R6WH330.0A0A2R6WH33_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.15e-19MYB_related family protein