PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0122s0030.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

Trihelix

Protein Properties

Length: 508aa MW: 56395.9 Da PI: 5.1791

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0122s0030.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.3	3.9e-08	14	90	1	69
trihelix 1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegek 69 rWt +e+l+L+ a + e r ++ k + + k+mr+rgf +rs++ C+ k +++++++ ki+e+++ Mapoly0122s0030.1.p 14 RWTLDETLTLVHALEhefgpslAWEARAANEVELKVSFQNIEKYMRHRGFsNRSANICRLKYSKMRNQFNKIQEWSQ 90 8*********9997777763333333334466899*********999*******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence Send to blast
MEEDTVGPTY SGGRWTLDET LTLVHALEHE FGPSLAWEAR AANEVELKVS FQNIEKYMRH 60 RGFSNRSANI CRLKYSKMRN QFNKIQEWSQ VNNMDFCCLS DSAKRAEPGL YSMNLQVLEL 120 MRSILDKCGE AHGTESGQEM DSVLVPTGEG IEQMDAKRRR ERTAVPDFTP FETEFAEFED 180 SVLKTVTENR NLAGIAHADA GISPSLMADT SKLPPVRNEK TDLQTESERR MDSASEASGQ 240 RFQELEFSNT DAENWITSVG EMSELPRAEA QTAILHTDQQ SGKEIYTILE STHEEIKVAD 300 YDNAGQMPFS EKVNQDEPLG PVQEAVTSSC DDGSLRFSMA AAEGGGRQSE RREILGGGFE 360 HLIDSDLAAG PKRLTVKRQR PDMNAEQSKL SQEAKSKKQL KTAEGESGHY FEKKGTEVPA 420 NKSEMLTAIK DTAGTGFIAK SRNLTHELRE IRSKQLEITK RNLMQQKKRL GALASVVHNA 480 CAVLEGSGKS SNAFSTSPTL YRTKAMD*

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence Send to blast

MEEDTVGPTY SGGRWTLDET LTLVHALEHE FGPSLAWEAR AANEVELKVS FQNIEKYMRH  60
RGFSNRSANI CRLKYSKMRN QFNKIQEWSQ VNNMDFCCLS DSAKRAEPGL YSMNLQVLEL  120
MRSILDKCGE AHGTESGQEM DSVLVPTGEG IEQMDAKRRR ERTAVPDFTP FETEFAEFED  180
SVLKTVTENR NLAGIAHADA GISPSLMADT SKLPPVRNEK TDLQTESERR MDSASEASGQ  240
RFQELEFSNT DAENWITSVG EMSELPRAEA QTAILHTDQQ SGKEIYTILE STHEEIKVAD  300
YDNAGQMPFS EKVNQDEPLG PVQEAVTSSC DDGSLRFSMA AAEGGGRQSE RREILGGGFE  360
HLIDSDLAAG PKRLTVKRQR PDMNAEQSKL SQEAKSKKQL KTAEGESGHY FEKKGTEVPA  420
NKSEMLTAIK DTAGTGFIAK SRNLTHELRE IRSKQLEITK RNLMQQKKRL GALASVVHNA  480
CAVLEGSGKS SNAFSTSPTL YRTKAMD*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6W9S6	0.0	A0A2R6W9S6_MARPO; Uncharacterized protein

Link Out ? help Back to Top
Phytozome	Mapoly0122s0030.1.p