PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0124s0064.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 255aa    MW: 28829.1 Da    PI: 8.6504
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0124s0064.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.5e-193382255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          ykGVr++  +g+WvAeIrdp   g+r r++lg+f t+eeAa+a+++ +++++g
  Mapoly0124s0064.1.p 33 EYKGVRQRT-WGKWVAEIRDP---GRRSRVWLGTFNTKEEAAAAYDRKALQFFG 82
                         69****999.**********8...556**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.43E-283292No hitNo description
SMARTSM003801.2E-303396IPR001471AP2/ERF domain
PfamPF008474.0E-133380IPR001471AP2/ERF domain
PROSITE profilePS5103221.2983390IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-283391IPR001471AP2/ERF domain
SuperFamilySSF541713.92E-213390IPR016177DNA-binding domain
PRINTSPR003673.8E-103445IPR001471AP2/ERF domain
PRINTSPR003673.8E-105672IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MNKRSCKGET GLTKKWSKFS SRGKGGPENF SCEYKGVRQR TWGKWVAEIR DPGRRSRVWL  60
GTFNTKEEAA AAYDRKALQF FGPTAHLNLQ SSRVATKSNQ NTVFTPLFSV PSRTLFSKTN  120
PFPQVSDLFS KTNPHPQVSD LFSKTNPHPQ VSEIPTEPSK TETDFSENFE ALYTGSNSND  180
ARWIQDTPIN DLPSLDTDFD SIRDSFIPLE LKGLKKSEEL PPLDTDIKNL DKQPDFDFTS  240
YLNEIAFKYN DGPR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-163489359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00411DAPTransfer from AT3G57600Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6W9H00.0A0A2R6W9H0_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.11e-32ERF family protein