PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0125s0019.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family E2F/DP
Protein Properties Length: 384aa    MW: 42613.4 Da    PI: 8.1606
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0125s0019.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP26.88.7e-09149205661
              E2F_TDP   6 Lrlltqkflklleksee.givtlnevakeLvse...dvknkrRRiYDilNVLealnliek 61 
                          L  l+ k   +  k ++   ++l e a+e+  e   +  +  RRiYD++NV ea++ +e+
  Mapoly0125s0019.1.p 149 LSNLAAK---VQTKLSHgSYCNLIELATEIHLEakeKHNTTMRRIYDVVNVTEAVGCVER 205
                          6666666...66666666889999999999777888666899****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM013721.6E-5144233IPR003316E2F/DP family, winged-helix DNA-binding domain
Gene3DG3DSA:1.10.10.102.4E-6145205IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467853.54E-5147206IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF023191.3E-7147205IPR003316E2F/DP family, winged-helix DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005667Cellular Componenttranscription factor complex
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MDFIRFSCRL KYTRLHLTTG LNVDDIQGRS TALDSLVHDG NHKFPASSGR QACARRNNGL  60
RPRVRRKLSR YSPESIRSEG KKDHTVVGGK SSSSESATLG SAPDNDHDVK LPQDPEDTEV  120
IQFVGGSGTQ GYQRRDSGRL GGRLKANNLS NLAAKVQTKL SHGSYCNLIE LATEIHLEAK  180
EKHNTTMRRI YDVVNVTEAV GCVERYVISR CGKKLKQGSK GSQVSGSLIR WCNSPSNDCG  240
NAKAVAERLR NNLNEKEEEL KSLAEEVELL ESLMRHRQEK GISAEGSPKS IKDSQTSESL  300
EDSEHFSNQP PASKPHGISV PFYILKTSKE SDDTNFEICT YTDKFGKEYQ VALSSDHQFQ  360
QIQWNWVVKE VLSSSDSDFS SNC*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6W9630.0A0A2R6W963_MARPO; Uncharacterized protein