PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0132s0008.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family HB-other
Protein Properties Length: 240aa    MW: 27509.7 Da    PI: 8.8499
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0132s0008.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.14.1e-10107162355
                          --SS--HHHHHHHHHHHHH...SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
             Homeobox   3 kRttftkeqleeLeelFek...nrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                          +R  +t+e l++L +  ek    +yps++e  e++++++Lt +q++ WF+N R ++
  Mapoly0132s0008.1.p 107 SRSVHTPESLQILRTWWEKnelIPYPSQREVYEMSRRTNLTLQQISDWFKNERSRK 162
                          6999**************833459*****************************984 PP
2Homeobox33.19.3e-111922272156
                          HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          ++++ps+e+re+LAk+ g+t  qV++WF N R + k
  Mapoly0132s0008.1.p 192 SHPNPSREQREDLAKESGVTYVQVSNWFMNFRKRSK 227
                          689*****************************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-1687164IPR009057Homeodomain-like
PROSITE profilePS5007112.617102165IPR001356Homeobox domain
SMARTSM003891.7E-10104169IPR001356Homeobox domain
SuperFamilySSF466895.85E-14106164IPR009057Homeodomain-like
CDDcd000862.39E-11108164No hitNo description
PfamPF059205.3E-9122161IPR008422Homeobox KN domain
PROSITE profilePS5007111.969166229IPR001356Homeobox domain
SuperFamilySSF466897.7E-14168233IPR009057Homeodomain-like
SMARTSM003892.7E-4170233IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.3E-19173230IPR009057Homeodomain-like
PfamPF059204.8E-11186225IPR008422Homeobox KN domain
CDDcd000861.83E-7193227No hitNo description
PROSITE patternPS000270204227IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MDMDSSSDQL AWAPVPSPDD EIVTEMRACE PCNRGEEFAS APISQGSMRE VLESNHPTCS  60
QQLEFTPRPA PVDDHVKATN SILDTNDDSS TGSLTSSRRK ELEGTGSRSV HTPESLQILR  120
TWWEKNELIP YPSQREVYEM SRRTNLTLQQ ISDWFKNERS RKWRDDPRKK KANRLPPRAT  180
RLLSTWASEH LSHPNPSREQ REDLAKESGV TYVQVSNWFM NFRKRSKARI RKAKASNIP*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6W7U61e-176A0A2R6W7U6_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP16717148
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.32e-09BEL1-like homeodomain 1