PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0136s0025.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 362aa    MW: 39418.9 Da    PI: 6.5718
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0136s0025.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-191868256
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                         +y+GVr+++ +gr++AeIrdp++   + r +lg+f+tae+Aa a+++a+++++g+
  Mapoly0136s0025.1.p 18 RYRGVRRRP-WGRYAAEIRDPNT---KERKWLGTFDTAEDAACAYDNAAREMRGP 68
                         69*******.**********933...5**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.29E-211875IPR016177DNA-binding domain
PfamPF008476.6E-121867IPR001471AP2/ERF domain
CDDcd000182.92E-291874No hitNo description
Gene3DG3DSA:3.30.730.102.0E-301874IPR001471AP2/ERF domain
PROSITE profilePS5103221.9831875IPR001471AP2/ERF domain
SMARTSM003802.5E-341883IPR001471AP2/ERF domain
PRINTSPR003672.8E-91930IPR001471AP2/ERF domain
PRINTSPR003672.8E-94157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010102Biological Processlateral root morphogenesis
GO:0010432Biological Processbract development
GO:0010451Biological Processfloral meristem growth
GO:0010582Biological Processfloral meristem determinacy
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MVGRKLGEKR GKRSRDGRYR GVRRRPWGRY AAEIRDPNTK ERKWLGTFDT AEDAACAYDN  60
AAREMRGPKA RTNFCFPAQL PSAKAAGFHT SSLGSNALEW IQRSLVASSW APAHSQSHSQ  120
AQAQATLGHG FSDFLLETRL ASSGSNILAS ESRLVADLGH QPQESRLLSC STSTSSNSNS  180
NSSCGGGRSP CSDAQVLAGP SGSSGFNELQ RMFQPPPRNP APLHPCPGPS LSTAALPCFS  240
GASRLCNPYS QYAISSFQES TPSPLLLDEQ YLQRKLEEQC DAIKLEEQCA AVSLDHQLHS  300
LQMHFCPPSP ASSYDDCYYG HDEAFFLDSM PALPEHDYYD ILGSLPEFNE DPTLLLVPPL  360
M*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-191074671Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1825KRGKRSRDGRYRGVRRRP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00520DAPTransfer from AT5G18560Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6W7680.0A0A2R6W768_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.13e-13ERF family protein