PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0257s0002.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

NF-YB

Protein Properties

Length: 68aa MW: 7304.2 Da PI: 9.0653

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0257s0002.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	29.9	1.3e-09	31	66	1	36
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvq 36 vreqdrfl i+n+s i+kkv+ +naki+ ake+v+ Mapoly0257s0002.1.p 31 VREQDRFLLISNISIIIKKVFTGNAKIAMYAKEIVH 66 69*******************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.20.10	5.8E-7	9	65	IPR009072	Histone-fold

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 68 aa Download sequence Send to blast
MAVTSSSGSQ YNSHSDDFGN AGGGDRDKSN VREQDRFLLI SNISIIIKKV FTGNAKIAMY 60 AKEIVHL*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024369282.1	1e-18	nuclear transcription factor Y subunit B-1-like isoform X1
Refseq	XP_024369283.1	5e-19	nuclear transcription factor Y subunit B-3-like isoform X2
TrEMBL	A0A2R6VZD3	9e-41	A0A2R6VZD3_MARPO; Uncharacterized protein
STRING	PP1S25_10V6.1	5e-18	(Physcomitrella patens)

Link Out ? help Back to Top
Phytozome	Mapoly0257s0002.1.p