PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0467s0001.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 217aa    MW: 23758.5 Da    PI: 8.462
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0467s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.92.3e-29132189259
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          dDgy+WrKYGqK+vk+s +prsYYrCt+ +Cp++k+v+rs+edp++ ++tY+g+H ++
  Mapoly0467s0001.1.p 132 DDGYTWRKYGQKDVKKSSYPRSYYRCTTLTCPSRKRVQRSDEDPSYYDVTYQGHHICP 189
                          8******************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.204126191IPR003657WRKY domain
SuperFamilySSF1182908.24E-26127190IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-28127189IPR003657WRKY domain
SMARTSM007741.5E-33131190IPR003657WRKY domain
PfamPF031064.7E-25132189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MATGGSKAQD QLVAKAGNLS LLLSGDDCHT PGRMQFTSPT TSPCDTPLSS SGLSEGGSPV  60
RPNQVAPDSD EDTVGNLSRR QSHDVSTSAT DPDLSDKPAL PKKRKYFPKG ILYQTKQRAI  120
GTGDPANYGP PDDGYTWRKY GQKDVKKSSY PRSYYRCTTL TCPSRKRVQR SDEDPSYYDV  180
TYQGHHICPL LEQRTWHIGL APSHIAIHEL LARCCI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-151321861872Probable WRKY transcription factor 4
2lex_A4e-151321861872Probable WRKY transcription factor 4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6VYV81e-158A0A2R6VYV8_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.17e-23WRKY DNA-binding protein 48