PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly3661s0001.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family LBD
Protein Properties Length: 75aa    MW: 8400.6 Da    PI: 4.836
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly3661s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26036.61.3e-117643894
               DUF260 38 GasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq.leqlkael 94
                         G + v+k+l++lpe+   da++sl++eAear++d v+G+ g + ++q++ +++l+ae+
  Mapoly3661s0001.1.p  7 GEKYVSKMLRDLPESSLADAVRSLYFEAEARIKDQVHGCSGELYRIQKDsVKELQAEI 64
                         77889**************************************999875267777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508918.805171IPR004883Lateral organ boundaries, LOB
PfamPF031955.1E-11764IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    Send to blast
MAGESLGEKY VSKMLRDLPE SSLADAVRSL YFEAEARIKD QVHGCSGELY RIQKDSVKEL  60
QAEILEEKIV MRPN*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6VXF74e-46A0A2R6VXF7_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.14e-16LOB domain-containing protein 1