PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr0014s0410.1
Common NameMTR_0014s0410
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 149aa    MW: 17044.4 Da    PI: 9.7036
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr0014s0410.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_119.91.7e-061342861
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1 28 ieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
                      +++Le++v eL +e++aL+ ++eel++  ++l+ 
  Medtr0014s0410.1  1 MDQLEQEVHELRKEMTALRAKVEELTNRLSSLTV 34
                      68*************************9999975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-4232No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MDQLEQEVHE LRKEMTALRA KVEELTNRLS SLTVTKDLPQ FQRRPQPPRQ TSYTQQPRQQ  60
APQQSNPQNQ ARRASYDPIP IKYAELLPIL LEKNLVQTRA PPRVPDKLPA GYRSDLSCAF  120
HQGAPGHDIE HCYALKAEIQ KLVQDKKN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr0014s0410.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1409140.0AC140914.20 Medicago truncatula clone mth2-18h17, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024635695.14e-56alpha/beta-gliadin-like
TrEMBLA0A072TKS71e-103A0A072TKS7_MEDTR; Uncharacterized protein
STRINGAES608142e-43(Medicago truncatula)
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]