PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr0126s0080.1
Common NameMTR_0126s0080
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 472aa    MW: 52280.6 Da    PI: 6.5938
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr0126s0080.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.2e-11216252541
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 
                       k  rr+++NReAAr+sR+RKka++++Le+   +L + 
  Medtr0126s0080.1 216 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQL 252
                       7789************************855444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.8E-9210258No hitNo description
SMARTSM003382.6E-7212298IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.197214258IPR004827Basic-leucine zipper domain
CDDcd147087.38E-24216268No hitNo description
SuperFamilySSF579597.5E-7216258No hitNo description
PfamPF001704.5E-8216254IPR004827Basic-leucine zipper domain
PROSITE patternPS000360219234IPR004827Basic-leucine zipper domain
PfamPF141441.5E-30307381IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    Send to blast
MGFSLAFEEA EQQEQVDASF LGTNNNSMLM ASKNSHESLQ QQQNLLHHHQ QQQQNQHHPH  60
HMHDHQISFG MMPSSSSSSM PSNYLNKDSS AYDLGELDQA FFLYLDGQAQ ADPSNVPDQR  120
QNSSSSGMKP PPTLNIFPSQ PMHVAPPPSN SKVSMGLTSP ITSGSKKPSQ PSMELANQRN  180
ENPSAPAPPK PVKKENNRKG TTSSSEHEGP KTPDPKTLRR LAQNREAARK SRLRKKAYVQ  240
QLETSRIKLN QLEQELQRAR AQGVLMGGGA VLGGDQGIPI SLNSISSEAA MFDVEYGRWL  300
EEHHRLVCEL RAALDEHLHE NELRLYVENC LAHYDQVINL KNILARTDVF HLVFGMWKTP  360
AERCFMWIGG FRPSELIKII VSQIEPLTEH QILGICGLQQ STQEAEEALS QGLDALNQSL  420
SETITSDSLS NPPNMANYMG QMALAMNKLS TLESFVRQGP GSNPGHPTYS P*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr0126s0080.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024630289.10.0bZIP transcription factor TGA10
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A072THF30.0A0A072THF3_MEDTR; BZIP family transcription factor
STRINGXP_004497935.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-144bZIP family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]