PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr0389s0010.1
Common NameMTR_0389s0010
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 111aa    MW: 12266 Da    PI: 5.8613
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr0389s0010.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_119.81.7e-0638722761
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1 27 eieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
                      ++e+Le++v eL +e ++L+ e+e+l+ +v++l +
  Medtr0389s0010.1 38 KMERLEQEVHELRGEVTTLRAEVEKLTSLVSSLMA 72
                      699***************************99966 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.5E-53869No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MNVVGMGVLP SPDKYSEVVK DFGNLVEPVI QTLVQTGKME RLEQEVHELR GEVTTLRAEV  60
EKLTSLVSSL MATNDPPLVQ QRPQSPYQPV CSQKPRQQAP RQSISQNQVP *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.200498e-61glandular trichome
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr0389s0010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0172031e-110FP017203.3 Medicago truncatula chromosome 5 clone mth4-9a24, COMPLETE SEQUENCE.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024635695.13e-43alpha/beta-gliadin-like
TrEMBLA0A072TR141e-72A0A072TR14_MEDTR; Uncharacterized protein
STRINGAES608141e-32(Medicago truncatula)
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]