PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr1g024420.1
Common NameMTR_1g024420
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family EIL
Protein Properties Length: 117aa    MW: 13585.8 Da    PI: 9.5971
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr1g024420.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN391.42.1e-28101091103
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      eel+ r   d+mllk++ke++ +   d+ ++++++k  k+  +a+ +  s+    + +YM+k+mevc a+Gf+Yg ip++gkp++g+s++Lr+W
  Medtr1g024420.1  10 EELEARICNDKMLLKKMKEERSK--RDNTTSLEQRK-TKTMARAQERSNSQLTHNVNRYMIKMMEVCDARGFIYGVIPHEGKPMSGSSENLRGW 100
                      8**************99988887..45666566655.4555566666666666778************************************** PP

                      XXXXXXXXX CS
             EIN3  95 Wkekvefdr 103
                      Wk+ v+f+ 
  Medtr1g024420.1 101 WKDIVKFEG 109
                      ******975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.1E-3010108No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    Send to blast
MVIKKELTIE ELEARICNDK MLLKKMKEER SKRDNTTSLE QRKTKTMARA QERSNSQLTH  60
NVNRYMIKMM EVCDARGFIY GVIPHEGKPM SGSSENLRGW WKDIVKFEGG EMECKV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr1g024420.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1446191e-103AC144619.3 Medicago truncatula clone mth2-8n3, complete sequence.
GenBankAC2254621e-103AC225462.6 Medicago truncatula clone mth2-16o15, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024630853.18e-48uncharacterized protein LOC112418638
TrEMBLG7I7322e-80G7I732_MEDTR; Ethylene insensitive protein
STRINGAES596954e-81(Medicago truncatula)
STRINGAES619504e-81(Medicago truncatula)
STRINGAES619674e-81(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-28EIL family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]