PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr2g086390.1
Common NameMTR_2g086390
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 289aa    MW: 32327.9 Da    PI: 6.9439
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr2g086390.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.62.4e-12210260454
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                      ++++rr++kNRe+A rsR+RK+a++ eLe +   L++eNk+Lk+ l e + 
  Medtr2g086390.1 210 DRKQRRMMKNRESAARSRARKQAYTIELEAELNLLQEENKQLKQFLAEAER 260
                      689****************************************87766554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-8207271IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.864209261IPR004827Basic-leucine zipper domain
PfamPF001701.9E-10211263IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.8E-12211264No hitNo description
SuperFamilySSF579597.74E-10211259No hitNo description
CDDcd147072.13E-20211274No hitNo description
PROSITE patternPS000360214229IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MALQKFEQED QNSALSLTLD DFQCNNDKNF SSLNMDEFLA SIWSSNDEDT AQTHNNTESV  60
ATAEHTISQQ LGNSSSVPPP ICKKTSDEVW SEIHKNQPQF KEANNLKRNE TLKKQETPGE  120
MTFEDFLVKA GVVKQSSSLS FQNHSGNVSN NMEPLNIASS GLRPSMEVGF PTQCVTSNSS  180
ATYQMTSGAE SSGAANRKRI IDGPPEVLLD RKQRRMMKNR ESAARSRARK QAYTIELEAE  240
LNLLQEENKQ LKQFLAEAER KRKQELLQRK QSAKVQKGTE KSSSSTTW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr2g086390.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003596811.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLG7ITS30.0G7ITS3_MEDTR; ABA response element-binding factor
STRINGAES670620.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20923374
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.12e-48bZIP family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]